Detailed information NTG0600072

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: NDK36_RS08810
• Genome accession: NZ_CP098491
• Coordinates: 1673731..1674720 (+)
• Length: 329 a.a.
• NCBI ID: WP_003232026.1
• Uniprot ID: P51835
• Organism: Bacillus subtilis strain NB205
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1668731..1679720

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NDK36_RS08795 (NDK36_08795)	acpP	1668928..1669161 (+)	234	WP_003154310.1	acyl carrier protein	-
NDK36_RS08800 (NDK36_08800)	rncS	1669301..1670050 (+)	750	WP_003232030.1	ribonuclease III	-
NDK36_RS08805 (NDK36_08805)	smc	1670151..1673711 (+)	3561	WP_014479770.1	chromosome segregation protein SMC	-
NDK36_RS08810 (NDK36_08810)	pilA	1673731..1674720 (+)	990	WP_003232026.1	signal recognition particle-docking protein FtsY	Machinery gene
NDK36_RS08815 (NDK36_08815)	sivC	1674756..1675241 (-)	486	WP_003245834.1	Ig-like domain-containing protein	-
NDK36_RS08820 (NDK36_08820)	srpM	1675419..1675751 (+)	333	WP_003238590.1	putative DNA-binding protein	-
NDK36_RS08825 (NDK36_08825)	ffh	1675765..1677105 (+)	1341	WP_014479771.1	signal recognition particle protein	-
NDK36_RS08830 (NDK36_08830)	rpsP	1677211..1677483 (+)	273	WP_003220815.1	30S ribosomal protein S16	-
NDK36_RS08835 (NDK36_08835)	khpA	1677483..1677728 (+)	246	WP_014476792.1	KH domain-containing protein	-
NDK36_RS08840 (NDK36_08840)	ylqD	1677850..1678236 (+)	387	WP_014476793.1	YlqD family protein	-
NDK36_RS08845 (NDK36_08845)	rimM	1678241..1678765 (+)	525	WP_003232013.1	ribosome maturation factor RimM	-
NDK36_RS08850 (NDK36_08850)	trmD	1678762..1679493 (+)	732	WP_003232011.1	tRNA (guanosine(37)-N1)-methyltransferase TrmD	-

Sequence

Protein

• Length: 329 a.a.
• Molecular weight: 36342.52 Da
• Isoelectric Point: 5.0164

>NTDB_id=600072 NDK36_RS08810 WP_003232026.1 1673731..1674720(+) (pilA) [Bacillus subtilis strain NB205]
MSFFKKLKEKITKQTDSVSEKFKDGLEKTRNSFQNKVNDLVSRYRKVDEDFFEELEEVLISADVGFTTVMELIDELKKEV
KRRNIQDPKEVQSVISEKLVEIYNSGDEQISELNIQDGRLNVILLVGVNGVGKTTTIGKLAHKMKQEGKSVVLAAGDTFR
AGAIEQLEVWGERTGVPVIKQTAGSDPAAVIYDAVHAAKARNADVLICDTAGRLQNKVNLMKELEKVKRVIEREVPEAPH
EVLLALDATTGQNAMAQAKEFSKATNVTGIALTKLDGTAKGGIVLAIRNELHIPVKLVGLGEKVDDLQEFDPESYVYGLF
SDLVEKADD

Nucleotide

• Length: 990 bp

>NTDB_id=600072 NDK36_RS08810 WP_003232026.1 1673731..1674720(+) (pilA) [Bacillus subtilis strain NB205]
ATGAGCTTTTTTAAAAAATTAAAAGAGAAAATCACAAAACAGACAGATTCCGTATCTGAAAAGTTTAAGGATGGCCTTGA
AAAAACAAGAAACTCCTTTCAAAACAAAGTGAATGATCTTGTATCCCGTTACCGTAAAGTGGATGAGGATTTCTTCGAAG
AGCTTGAAGAGGTTCTTATCAGCGCGGATGTCGGTTTTACAACCGTTATGGAATTAATAGATGAACTGAAAAAAGAAGTC
AAACGCAGAAATATTCAAGATCCAAAGGAAGTCCAGTCAGTGATTTCTGAGAAACTGGTCGAGATTTATAACAGCGGAGA
TGAGCAAATTTCAGAACTGAACATCCAGGATGGGCGTTTAAACGTAATCCTTCTGGTAGGTGTAAACGGCGTCGGGAAAA
CAACAACGATCGGAAAGCTTGCCCATAAAATGAAACAAGAAGGAAAATCTGTCGTACTTGCCGCCGGAGACACTTTCAGA
GCGGGAGCCATTGAACAACTGGAAGTATGGGGAGAGCGTACAGGAGTGCCTGTCATTAAGCAGACGGCTGGAAGCGATCC
GGCGGCTGTCATCTACGATGCTGTTCATGCTGCGAAAGCAAGAAATGCCGATGTATTAATTTGTGATACGGCAGGTCGTC
TCCAAAACAAAGTAAATCTCATGAAAGAGCTTGAAAAAGTAAAACGTGTTATCGAAAGAGAAGTTCCTGAAGCTCCGCAT
GAGGTGCTGCTTGCCCTTGATGCCACGACCGGCCAAAATGCAATGGCTCAGGCAAAAGAGTTCTCTAAAGCAACAAATGT
TACCGGCATTGCTTTAACGAAGCTTGACGGTACGGCAAAGGGCGGTATCGTCCTTGCGATTCGCAACGAGCTTCACATCC
CGGTTAAACTAGTCGGTTTAGGAGAAAAAGTTGATGATCTTCAGGAATTTGATCCAGAATCCTATGTGTACGGACTCTTT
TCAGATTTAGTGGAAAAAGCCGACGATTAA

Domains

Predicted by InterProScan.

• SRP54-type protein, GTPase domain (SRP54) (121-320)

• SRP54-type protein, helical bundle domain (SRP54_N) (34-99)

3D structure

• AlphaFold DB: P51835

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	43.709	91.793	0.401