Detailed information    

insolico Bioinformatically predicted

Overview

Name   comS   Type   Regulator
Locus tag   K6973_RS00385 Genome accession   NZ_CP082206
Coordinates   61498..61596 (+) Length   32 a.a.
NCBI ID   WP_014611913.1    Uniprot ID   A0A380JYX6
Organism   Streptococcus dysgalactiae strain DY107     
Function   activate transcription of comX (predicted from homology)   
Competence regulation

Genomic Context

Location: 56498..66596
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  K6973_RS00360 (K6973_00360) purE 57004..57492 (+) 489 WP_129555152.1 5-(carboxyamino)imidazole ribonucleotide mutase -
  K6973_RS00365 (K6973_00365) purK 57479..58561 (+) 1083 WP_222819420.1 5-(carboxyamino)imidazole ribonucleotide synthase -
  K6973_RS00370 (K6973_00370) - 58690..58917 (+) 228 WP_222819421.1 phosphoribosylaminoimidazole carboxylase -
  K6973_RS00375 (K6973_00375) purB 59065..60357 (+) 1293 WP_222819422.1 adenylosuccinate lyase -
  K6973_RS00380 (K6973_00380) comR 60499..61410 (+) 912 WP_138124363.1 XRE family transcriptional regulator Regulator
  K6973_RS00385 (K6973_00385) comS 61498..61596 (+) 99 WP_014611913.1 quorum-sensing system DWW-type pheromone Regulator
  K6973_RS00390 (K6973_00390) ruvB 61630..62628 (+) 999 WP_222819423.1 Holliday junction branch migration DNA helicase RuvB -
  K6973_RS00395 (K6973_00395) - 62763..63194 (+) 432 WP_222819424.1 low molecular weight protein-tyrosine-phosphatase -
  K6973_RS00400 (K6973_00400) - 63223..63624 (+) 402 WP_003049089.1 MORN repeat-containing protein -
  K6973_RS00405 (K6973_00405) - 63621..65396 (+) 1776 WP_218654988.1 acyltransferase family protein -

Sequence

Protein


Download         Length: 32 a.a.        Molecular weight: 3771.59 Da        Isoelectric Point: 10.4764

>NTDB_id=600072 K6973_RS00385 WP_014611913.1 61498..61596(+) (comS) [Streptococcus dysgalactiae strain DY107]
MFKKIKPYLLLAAVVAFKVARAMNEFDWWNLG

Nucleotide


Download         Length: 99 bp        

>NTDB_id=600072 K6973_RS00385 WP_014611913.1 61498..61596(+) (comS) [Streptococcus dysgalactiae strain DY107]
ATGTTTAAAAAAATCAAACCATATTTGTTATTAGCCGCAGTCGTTGCTTTCAAAGTTGCTCGTGCAATGAACGAATTTGA
TTGGTGGAACCTAGGGTGA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A380JYX6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comS Streptococcus pyogenes MGAS315

84.375

100

0.844
  comS Streptococcus pyogenes MGAS8232

45.161

96.875

0.437