Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   K6972_RS09455 Genome accession   NZ_CP082203
Coordinates   1945887..1947146 (-) Length   419 a.a.
NCBI ID   WP_029186785.1    Uniprot ID   -
Organism   Streptococcus suis strain NJ3     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 1940887..1952146
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  K6972_RS09435 (K6972_09435) dhaL 1941856..1942431 (+) 576 WP_222759403.1 dihydroxyacetone kinase subunit DhaL -
  K6972_RS09440 (K6972_09440) dhaM 1942428..1942802 (+) 375 WP_205028483.1 dihydroxyacetone kinase phosphoryl donor subunit DhaM -
  K6972_RS09445 (K6972_09445) - 1942812..1943522 (+) 711 WP_222759405.1 MIP/aquaporin family protein -
  K6972_RS09450 (K6972_09450) - 1943746..1945608 (-) 1863 WP_222759407.1 proline--tRNA ligase -
  K6972_RS09455 (K6972_09455) eeP 1945887..1947146 (-) 1260 WP_029186785.1 RIP metalloprotease RseP Regulator
  K6972_RS09460 (K6972_09460) - 1947156..1947962 (-) 807 WP_222812547.1 phosphatidate cytidylyltransferase -
  K6972_RS09465 (K6972_09465) - 1947972..1948727 (-) 756 WP_013730586.1 isoprenyl transferase -
  K6972_RS09470 (K6972_09470) yajC 1948841..1949164 (-) 324 WP_014638693.1 preprotein translocase subunit YajC -
  K6972_RS09475 (K6972_09475) - 1949274..1950566 (-) 1293 WP_002937782.1 adenylosuccinate synthase -

Sequence


Protein


Download         Length: 419 a.a.        Molecular weight: 44887.24 Da        Isoelectric Point: 5.6974

>NTDB_id=599953 K6972_RS09455 WP_029186785.1 1945887..1947146(-) (eeP) [Streptococcus suis strain NJ3]
MKGILAFIFIFGVIVVVHEFGHFYFAKKAGILVREFAIGMGPKIFAHTGKDGTLYTIRILPLGGYVRMAGWGEDKTEIKT
GSPASLSLNEAGVVTRINLSGKQLDSLSLPMNVTSFDFEEKLEITGLVLEESKTYKVDHDATIVEEDGTEVRIAPLDVQY
QNATVWGRLMTNFAGPMNNFILGILVFIILFFMQGGVANPSSNAVSITEGGALQAAGVVTGDKILSVNGNATDSYTEVAT
IISKVATDATTAPSFDLVVEHDGKNRHVSVTAEQVDGAYRIGISPILKTGFVDKIVGGFQEAGATALRVVTALKNLIANF
DVKQLGGPVAIYKVSSQAAEFGLVSVLGLMAALSINLGIFNLIPIPALDGGKIVMNILEAIRRKPLKPETESYITLAGVA
VMVVLMIVVTWNDIIRVFF

Nucleotide


Download         Length: 1260 bp        

>NTDB_id=599953 K6972_RS09455 WP_029186785.1 1945887..1947146(-) (eeP) [Streptococcus suis strain NJ3]
ATGAAGGGAATTTTAGCATTTATATTTATATTTGGTGTGATTGTGGTTGTCCATGAATTTGGTCACTTCTACTTCGCCAA
GAAAGCGGGTATCCTTGTGAGGGAATTTGCGATTGGGATGGGTCCCAAAATTTTCGCTCATACGGGTAAGGATGGGACGC
TTTACACCATCCGTATTCTTCCTCTAGGTGGCTATGTTCGAATGGCTGGATGGGGTGAAGATAAGACAGAGATTAAGACA
GGTAGTCCTGCCAGCCTCAGCTTGAATGAAGCTGGTGTTGTGACGCGGATTAATTTGTCTGGTAAGCAACTGGATAGTCT
TAGTTTGCCAATGAATGTAACGAGTTTTGATTTTGAAGAAAAATTGGAAATCACAGGCTTAGTCTTGGAAGAAAGCAAGA
CCTATAAGGTTGATCACGATGCCACGATTGTAGAGGAGGATGGAACAGAAGTTCGGATTGCTCCACTTGATGTTCAGTAT
CAAAATGCGACAGTCTGGGGTCGGTTGATGACCAACTTTGCGGGACCCATGAATAATTTTATTCTAGGGATTCTAGTATT
TATTATTTTGTTCTTCATGCAAGGCGGGGTTGCCAACCCATCAAGCAATGCAGTAAGTATTACTGAAGGTGGTGCTTTGC
AGGCTGCAGGTGTTGTTACAGGGGACAAGATTCTTTCGGTCAATGGGAACGCGACAGACAGCTACACAGAAGTTGCAACG
ATTATTAGCAAAGTAGCGACAGATGCAACAACAGCCCCAAGCTTTGATTTGGTTGTTGAGCATGATGGGAAAAACCGTCA
TGTCTCCGTTACTGCTGAACAAGTAGATGGGGCCTATCGAATTGGTATTTCACCGATTTTGAAAACTGGTTTCGTTGATA
AAATTGTCGGTGGTTTCCAAGAAGCGGGAGCGACAGCTCTTAGGGTTGTAACAGCTTTGAAGAATCTAATTGCAAACTTT
GATGTTAAGCAGTTGGGGGGACCGGTTGCTATTTACAAAGTAAGTTCTCAAGCGGCTGAATTTGGTTTGGTTTCTGTATT
AGGGCTAATGGCTGCGCTCTCCATTAACCTTGGAATCTTTAATTTGATTCCAATTCCAGCCTTGGATGGTGGTAAGATTG
TTATGAATATTCTGGAAGCCATTCGCAGAAAACCACTCAAACCAGAGACGGAATCTTATATCACTCTAGCAGGTGTAGCC
GTTATGGTGGTTCTTATGATAGTGGTCACTTGGAATGATATTATAAGAGTCTTCTTCTAA

Domains


Predicted by InterproScan.

(6-405)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMD-9

65.238

100

0.654

  eeP Streptococcus thermophilus LMG 18311

65.238

100

0.654