Detailed information    

insolico Bioinformatically predicted

Overview


Name   chpA   Type   Regulator
Locus tag   ABWED_RS03745 Genome accession   NZ_CP082143
Coordinates   790090..794532 (+) Length   1480 a.a.
NCBI ID   WP_005104052.1    Uniprot ID   N9QIR1
Organism   Acinetobacter lwoffii strain ED23-35     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context


Location: 785090..799532
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABWED_RS03720 (ABWED_0778) - 785550..786197 (-) 648 WP_005104054.1 hypothetical protein -
  ABWED_RS03725 (ABWED_0779) pilG 786484..786867 (+) 384 WP_004280711.1 twitching motility response regulator PilG Regulator
  ABWED_RS03730 (ABWED_0780) - 786893..787261 (+) 369 WP_004280710.1 response regulator -
  ABWED_RS03735 (ABWED_0781) - 787267..787803 (+) 537 WP_004280709.1 chemotaxis protein CheW -
  ABWED_RS03740 (ABWED_0782) - 787850..789922 (+) 2073 WP_005106253.1 methyl-accepting chemotaxis protein -
  ABWED_RS03745 (ABWED_0783) chpA 790090..794532 (+) 4443 WP_005104052.1 Hpt domain-containing protein Regulator
  ABWED_RS03750 (ABWED_0784) - 794536..794994 (+) 459 WP_004280706.1 hypothetical protein -
  ABWED_RS03755 (ABWED_0785) dapE 795060..796196 (-) 1137 WP_004280705.1 succinyl-diaminopimelate desuccinylase -
  ABWED_RS03760 (ABWED_0786) - 796318..796470 (-) 153 WP_004280704.1 entericidin A/B family lipoprotein -
  ABWED_RS03765 (ABWED_0787) - 796583..797458 (-) 876 WP_004280703.1 DUF1853 family protein -
  ABWED_RS03770 (ABWED_0788) - 797546..797899 (+) 354 Protein_715 YbaN family protein -
  ABWED_RS03775 (ABWED_0789) elsL 798025..798558 (+) 534 WP_004280701.1 cell wall-recycling L,D-carboxypeptidase ElsL -

Sequence


Protein


Download         Length: 1480 a.a.        Molecular weight: 165561.55 Da        Isoelectric Point: 4.3362

>NTDB_id=599482 ABWED_RS03745 WP_005104052.1 790090..794532(+) (chpA) [Acinetobacter lwoffii strain ED23-35]
MKEILKNLVETTTLPEDSYLDQDAEILEIFVEEIEEIFVELNALFPEWLSNPDHQENLKTIRRHFHTLKGSGRMVGAKSA
GEMAWAVEDTLNRVLSGSIQLTPTVQKFAQAVLNVYQYALYPKFKHVQQLDLDLRPMVLLGQQLQQQISPEPALEELLAL
ADHLTAEGQMTGLELADNEPSEVELTVAPVELPVRSDIEETVAIFIEEAEEHLETIATFLRTEDEKSQDYNALIRAIHTL
RGSSSMAQIDQIFEASSKVEHLFKTLLQDEIVSTSKETALLIQYAEFVSDYLHLLRQGNTAKLDAVYATFERVWHDYGFA
VTETNSIQTQGLVSKLVELDIDLLLDAEFEFDKRAQVDYPEYIQALSQQAAELLAHTESRAAQGIHEFTADLKLAYDALL
EKPVLLNSDYAYELFAQAHQEFIHLFDTLAAGQRVILNDEIQKILSELSAFVQQDLEIFAEDTSNQNVELSSETTQVAET
GSVDFASLSQRIAADRQQWQSAETNRDFDEELLSIFLEEADELLAGIDEDLNTWSKKQDDTTSLNNLMRHLHTLKGGANM
IAASHIGLIAHELESIYERVIRQQIAVTPALIQIIRLVQDNVSDRIQSIREDGIDYPAPEAIAILQNIQALVSGQAVAAA
ESANAVVKVAEVEATSIPKPQLEESATTEQPATDLAEAEELLEILESPEATEDTPVERSEEDELKSIVEESFLEESEEIL
ANAEKLLNQWFDQRSDRSLLLQLQRAAHSIKGGARMIDVEEVASIAYELETTFEQFAVYQFNSNAYDGLLQKTLVWLRQA
IFQRDYNGFEQLHSSLKKIAYVDVTAQLPERLAKTDNLVVSTDFGFVEGDGTEPPQMMGEWANSGSSDSNNEMIRISADL
VEKMIDLSGENSINRSRIEMDLGQLGNTLNEMELAIKRLADQLRRMEGELESQIIAKHGSENSRYADFDPLEMDQYSSLN
QLSKSLAESASDLVDFKSTLADKIRETEGLLLQQSRIQAEIQESLMRTRLVPFDRMLPRLQRIVRQTSTTLNRPAELIVQ
NTEGELDRNILERLVTPFEHMLRNAIDHGLEDTADRIALNKPEVGSIVLNISRQGTDVIVSFSDDGKGIDAEKIREKALS
LDLIKADQVIDQEEILQFIFHPGFSTAKAVTQISGRGVGLDVVQSEIKSLGGHVSVSSELGKGTVFTIRVPTTVAVSDAL
MVKVGDQQYAISLAQIDRIVRIAPTTLESYFNSKDDYFKIDGANYKLRYLSEFVGNQPIPRLNNVGHSLPVLLIKGNSGQ
TIALLVDQLVGSRAQIVVKPIGQQFANVGVVAGATILGDGQVCLILDGQNVARQIQATQRVKQLNDQRDGSRNSNARRLV
MIVDDSVTVRKVTSRLLERQGYDIVTAKDGVDAIEQLENVRPDLMLLDIEMPRMDGFEVTNLVRHHDIHRDLPIIMITSR
TGEKHRERAFSLGVTHYMGKPFQEAELLANIQQLIAEKQG

Nucleotide


Download         Length: 4443 bp        

>NTDB_id=599482 ABWED_RS03745 WP_005104052.1 790090..794532(+) (chpA) [Acinetobacter lwoffii strain ED23-35]
ATGAAAGAAATATTAAAAAATTTAGTTGAAACGACAACGCTTCCTGAAGATAGTTATCTTGACCAAGATGCAGAAATTCT
TGAAATTTTTGTTGAGGAAATCGAAGAGATCTTCGTTGAGTTAAATGCTTTATTTCCAGAATGGTTGAGCAATCCAGATC
ATCAAGAAAATCTGAAGACCATTCGCCGCCATTTTCACACCCTGAAAGGTTCAGGCCGCATGGTCGGGGCAAAATCGGCA
GGGGAAATGGCCTGGGCGGTTGAAGATACCTTAAACCGGGTTTTGTCCGGTTCGATTCAGCTAACACCGACGGTACAGAA
ATTTGCCCAAGCGGTACTGAATGTCTATCAATATGCTTTATATCCAAAATTCAAACATGTACAGCAATTGGATCTCGATC
TGCGTCCAATGGTGCTGTTGGGACAACAATTACAACAACAAATTTCGCCTGAACCTGCGCTAGAAGAATTATTAGCATTG
GCAGATCATTTGACCGCTGAAGGTCAGATGACAGGTCTTGAGCTTGCAGACAATGAGCCAAGTGAAGTTGAGCTAACAGT
AGCTCCAGTAGAATTACCGGTTCGCAGTGATATCGAAGAAACTGTGGCGATCTTTATTGAAGAAGCAGAAGAGCATCTGG
AAACGATAGCCACCTTCCTTCGTACTGAAGATGAAAAATCACAAGATTATAATGCGTTGATTCGTGCGATTCATACCTTG
CGCGGCAGTTCATCCATGGCGCAGATTGACCAGATTTTTGAAGCCAGTTCTAAAGTAGAGCATCTGTTCAAAACCTTGCT
ACAAGATGAAATTGTCTCCACTTCAAAAGAAACTGCTTTACTGATTCAGTATGCCGAGTTTGTCAGTGACTATCTGCATT
TGCTACGTCAGGGCAATACTGCAAAACTGGATGCGGTATACGCCACCTTTGAGCGTGTCTGGCATGATTATGGCTTTGCA
GTTACTGAAACCAATAGCATTCAGACGCAAGGTTTGGTGTCTAAACTGGTTGAGCTGGATATTGATCTGTTATTGGATGC
CGAGTTTGAATTTGATAAACGCGCCCAAGTCGATTATCCGGAATATATTCAGGCACTCAGCCAGCAGGCTGCAGAATTGC
TGGCACATACAGAAAGCCGGGCAGCGCAAGGCATTCATGAATTCACTGCCGACCTGAAATTGGCTTATGATGCGCTGCTT
GAAAAGCCAGTGCTGCTAAACAGCGATTATGCTTATGAACTGTTCGCACAGGCGCATCAGGAATTTATTCATTTATTTGA
TACCTTGGCCGCAGGACAGCGCGTCATTCTGAATGATGAGATTCAAAAAATACTCAGTGAACTGTCTGCATTTGTGCAGC
AGGATCTCGAGATATTTGCTGAAGATACTAGCAATCAGAATGTTGAGCTAAGCTCAGAAACCACACAAGTAGCCGAGACT
GGCAGTGTCGATTTTGCTAGTTTGAGTCAACGCATCGCTGCGGATCGTCAGCAGTGGCAAAGTGCTGAAACTAACCGTGA
TTTTGATGAAGAATTACTAAGTATCTTCCTGGAAGAAGCAGATGAATTGCTGGCAGGCATTGATGAAGATCTGAATACCT
GGAGCAAAAAACAGGACGATACAACTTCGCTGAACAATCTGATGCGTCATTTGCATACCTTAAAAGGTGGTGCAAACATG
ATTGCAGCTTCGCATATCGGTTTGATTGCGCATGAACTGGAAAGTATTTATGAGCGGGTGATTCGTCAGCAAATTGCCGT
GACACCTGCTTTAATCCAGATTATCCGTCTGGTTCAGGACAACGTGTCCGATCGTATTCAATCGATTCGGGAAGACGGTA
TTGATTATCCTGCACCAGAAGCGATTGCGATTCTGCAAAATATTCAGGCGCTGGTTTCTGGACAAGCTGTTGCTGCTGCG
GAGAGCGCGAACGCTGTAGTTAAAGTTGCAGAGGTCGAAGCGACATCAATTCCTAAACCGCAACTTGAAGAGTCAGCAAC
GACTGAACAGCCTGCAACTGATCTGGCTGAAGCTGAAGAATTACTGGAAATCTTGGAATCTCCTGAGGCCACTGAAGACA
CACCAGTAGAACGCTCTGAAGAAGACGAACTGAAATCGATTGTTGAAGAATCTTTCCTTGAAGAATCCGAAGAGATTCTG
GCGAATGCCGAGAAGCTCCTCAATCAATGGTTTGATCAGCGTAGTGACCGTAGTTTATTGCTGCAATTACAGCGTGCTGC
CCACAGTATCAAGGGCGGCGCACGTATGATTGATGTTGAAGAAGTGGCCAGTATTGCCTATGAGCTGGAAACAACTTTCG
AACAGTTTGCGGTCTATCAATTTAACTCGAATGCCTATGATGGCTTATTGCAGAAAACGCTGGTCTGGTTAAGACAGGCG
ATTTTCCAGCGTGACTATAACGGTTTTGAGCAGCTGCACAGCAGTCTGAAAAAGATTGCTTATGTGGACGTTACTGCGCA
ATTGCCTGAGCGTCTGGCGAAAACAGATAATCTGGTGGTCAGTACCGACTTCGGCTTTGTTGAAGGTGATGGTACTGAGC
CGCCACAGATGATGGGTGAGTGGGCGAATAGTGGTAGCAGCGATAGCAATAACGAGATGATCCGTATCTCTGCTGATCTG
GTCGAGAAGATGATTGATCTGTCCGGTGAGAACTCGATTAACCGTTCGCGTATCGAGATGGACCTGGGTCAGCTGGGCAA
TACCTTGAACGAGATGGAACTGGCAATCAAGCGTCTTGCCGATCAGTTACGTCGAATGGAAGGCGAGCTGGAATCACAGA
TTATTGCCAAACATGGTTCAGAGAACTCGCGCTATGCCGACTTTGACCCGCTGGAAATGGACCAATATTCCTCTCTAAAC
CAGCTGTCCAAATCACTGGCAGAATCTGCATCGGATTTGGTCGACTTCAAGAGTACCTTAGCCGACAAGATTCGCGAAAC
CGAAGGACTGTTATTGCAACAATCCCGTATTCAGGCCGAGATTCAGGAAAGCCTGATGCGTACCCGTCTGGTCCCATTTG
ACCGGATGTTGCCGCGTTTACAGCGTATTGTGCGTCAAACCTCGACCACCTTGAACCGTCCTGCAGAACTGATCGTACAG
AATACCGAAGGTGAACTGGATCGTAATATTCTCGAGCGTCTGGTCACACCATTTGAGCATATGCTGCGTAATGCGATTGA
CCATGGCCTGGAAGATACGGCAGATCGTATCGCACTGAACAAGCCGGAAGTGGGTTCGATTGTCTTGAACATCAGCCGCC
AGGGAACCGATGTAATCGTGTCCTTTAGTGATGATGGTAAGGGGATTGATGCAGAGAAGATTCGTGAAAAAGCGCTGAGT
CTGGATCTAATCAAAGCGGATCAAGTCATTGATCAGGAAGAAATCCTGCAATTTATCTTCCATCCCGGTTTCAGTACCGC
GAAAGCAGTGACCCAGATTTCTGGTCGTGGTGTCGGTCTGGACGTGGTACAAAGCGAGATCAAATCATTGGGCGGCCATG
TGTCAGTAAGCTCGGAACTGGGCAAGGGTACGGTCTTTACGATTCGCGTACCGACGACCGTAGCGGTCAGCGATGCCTTG
ATGGTGAAAGTGGGCGATCAGCAATATGCGATTTCTCTGGCACAGATTGACCGAATCGTGCGTATTGCGCCGACCACATT
GGAAAGCTATTTCAACAGTAAAGATGACTATTTCAAGATCGATGGCGCAAACTATAAGCTGCGCTATCTGTCTGAGTTTG
TGGGCAACCAGCCGATTCCACGTCTGAATAATGTTGGGCATTCATTGCCGGTGCTGTTGATTAAAGGAAATAGTGGTCAG
ACCATTGCCTTACTGGTCGATCAGCTGGTCGGTTCACGAGCGCAGATTGTAGTAAAACCGATTGGACAGCAGTTTGCCAA
CGTCGGGGTAGTGGCCGGTGCCACGATTCTGGGTGATGGTCAGGTCTGTCTGATTCTCGATGGACAGAATGTTGCCCGCC
AGATTCAGGCGACACAGCGTGTCAAACAGCTGAATGATCAGCGTGATGGTTCGCGTAATTCAAATGCACGTCGTCTGGTG
ATGATTGTCGATGACTCGGTGACTGTACGTAAAGTGACGTCGCGTCTGCTTGAACGTCAAGGCTATGATATTGTCACTGC
CAAAGATGGCGTAGATGCGATCGAGCAGCTTGAAAACGTCAGACCGGATCTGATGTTGCTGGATATCGAAATGCCGCGCA
TGGACGGTTTCGAAGTGACCAATCTGGTTCGTCACCATGATATTCACCGTGACTTGCCGATTATCATGATTACCTCACGT
ACCGGTGAGAAGCATCGTGAACGTGCATTCAGCCTGGGCGTAACGCACTATATGGGTAAACCGTTCCAGGAAGCGGAATT
GCTGGCCAATATCCAACAACTGATTGCTGAAAAACAGGGGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  chpA Acinetobacter baumannii strain A118

61.243

100

0.626