Detailed information    

insolico Bioinformatically predicted

Overview

Name   letA   Type   Regulator
Locus tag   NCL52_RS18720 Genome accession   NZ_CP098417
Coordinates   3642988..3643362 (-) Length   124 a.a.
NCBI ID   WP_003227621.1    Uniprot ID   A0A9W5LLN9
Organism   Bacillus subtilis strain N2-10     
Function   regulate competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 3637988..3648362
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NCL52_RS18695 (NCL52_18695) - 3638152..3638313 (-) 162 WP_003227632.1 hypothetical protein -
  NCL52_RS18700 (NCL52_18700) glpX 3638528..3639493 (-) 966 WP_003242962.1 class II fructose-bisphosphatase -
  NCL52_RS18705 (NCL52_18705) murAB 3639524..3640813 (-) 1290 WP_003227628.1 UDP-N-acetylglucosamine 1-carboxyvinyltransferase -
  NCL52_RS18710 (NCL52_18710) fsa 3641192..3641830 (-) 639 WP_003227626.1 fructose-6-phosphate aldolase -
  NCL52_RS18715 (NCL52_18715) fbaA 3641950..3642807 (-) 858 WP_003243339.1 class II fructose-bisphosphate aldolase -
  NCL52_RS18720 (NCL52_18720) letA 3642988..3643362 (-) 375 WP_003227621.1 sporulation initiation phosphotransferase Spo0F Regulator
  NCL52_RS18725 (NCL52_18725) ywjG 3643528..3644049 (+) 522 WP_014481199.1 DUF2529 domain-containing protein -
  NCL52_RS18730 (NCL52_18730) pyrG 3644131..3645738 (-) 1608 WP_003227612.1 glutamine hydrolyzing CTP synthase -
  NCL52_RS18735 (NCL52_18735) rpoE 3645980..3646501 (-) 522 WP_014665742.1 DNA-directed RNA polymerase subunit delta -
  NCL52_RS18740 (NCL52_18740) acdA 3646684..3647823 (-) 1140 WP_049140956.1 acyl-CoA dehydrogenase AcdA -

Sequence

Protein


Download         Length: 124 a.a.        Molecular weight: 14227.68 Da        Isoelectric Point: 4.6400

>NTDB_id=599271 NCL52_RS18720 WP_003227621.1 3642988..3643362(-) (letA) [Bacillus subtilis strain N2-10]
MMNEKILIVDDQYGIRILLNEVFNKEGYQTFQAANGLQALDIVTKERPDLVLLDMKIPGMDGIEILKRMKVIDENIRVII
MTAYGELDMIQESKELGALTHFAKPFDIDEIRDAVKKYLPLKSN

Nucleotide


Download         Length: 375 bp        

>NTDB_id=599271 NCL52_RS18720 WP_003227621.1 3642988..3643362(-) (letA) [Bacillus subtilis strain N2-10]
ATGATGAATGAAAAAATTTTAATCGTTGATGATCAATACGGCATTCGTATTTTGCTAAATGAAGTGTTCAATAAAGAAGG
CTACCAGACGTTTCAGGCTGCGAACGGCCTGCAGGCGCTTGACATTGTGACAAAAGAACGGCCCGACCTTGTGCTCTTGG
ACATGAAAATTCCCGGCATGGACGGAATCGAAATCTTAAAACGGATGAAGGTCATTGACGAAAACATCCGGGTCATTATC
ATGACGGCATACGGAGAGCTCGACATGATCCAAGAATCGAAGGAATTGGGCGCCCTGACGCACTTTGCCAAGCCGTTTGA
CATCGACGAAATCAGAGACGCCGTCAAAAAATATCTGCCCCTGAAGTCTAACTGA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(6-116)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A9W5LLN9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  letA Legionella pneumophila str. Paris

38.462

94.355

0.363
  letA Legionella pneumophila strain ERS1305867

38.462

94.355

0.363