Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   NCL52_RS09685 Genome accession   NZ_CP098417
Coordinates   1922167..1922784 (-) Length   205 a.a.
NCBI ID   WP_003238209.1    Uniprot ID   G4NVV3
Organism   Bacillus subtilis strain N2-10     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1917167..1927784
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NCL52_RS09655 (NCL52_09655) yndJ 1917485..1919125 (+) 1641 WP_137200783.1 YndJ family protein -
  NCL52_RS09660 (NCL52_09660) - 1919213..1919527 (+) 315 WP_170948349.1 hypothetical protein -
  NCL52_RS09665 (NCL52_09665) pghL 1919753..1920511 (+) 759 WP_086343883.1 gamma-polyglutamate hydrolase PghL -
  NCL52_RS09670 (NCL52_09670) - 1920538..1920987 (-) 450 WP_003245454.1 YndM family protein -
  NCL52_RS09675 (NCL52_09675) fosM 1921195..1921629 (+) 435 WP_003231604.1 FosM family fosfomycin resistance protein -
  NCL52_RS09680 (NCL52_09680) - 1921538..1921880 (+) 343 Protein_1856 hypothetical protein -
  NCL52_RS09685 (NCL52_09685) dinR/lexA 1922167..1922784 (-) 618 WP_003238209.1 transcriptional repressor LexA Regulator
  NCL52_RS09690 (NCL52_09690) yneA 1922934..1923251 (+) 318 WP_003231598.1 cell division suppressor protein YneA -
  NCL52_RS09695 (NCL52_09695) dinL 1923270..1923923 (+) 654 WP_137200785.1 recombinase family protein -
  NCL52_RS09700 (NCL52_09700) ynzC 1923987..1924220 (+) 234 WP_024573193.1 DUF896 domain-containing protein -
  NCL52_RS09705 (NCL52_09705) recP/tkt 1924389..1926392 (+) 2004 WP_137200787.1 transketolase Machinery gene
  NCL52_RS09710 (NCL52_09710) sirA 1926545..1926991 (+) 447 WP_003231591.1 sporulation inhibitor of replication protein SirA -
  NCL52_RS09715 (NCL52_09715) yneF 1927077..1927295 (+) 219 WP_003221221.1 YneF family protein -
  NCL52_RS09720 (NCL52_09720) ynzD 1927369..1927542 (-) 174 WP_010886518.1 aspartyl-phosphate phosphatase YnzD -

Sequence

Protein


Download         Length: 205 a.a.        Molecular weight: 22849.36 Da        Isoelectric Point: 5.1450

>NTDB_id=599209 NCL52_RS09685 WP_003238209.1 1922167..1922784(-) (dinR/lexA) [Bacillus subtilis strain N2-10]
MTKLSKRQLDILRFIKAEVKSKGYPPSVREIGEAVGLASSSTVHGHLARLETKGLIRRDPTKPRAIEILDEEVDIPQSQV
VNVPVIGKVTAGSPITAVENIEEYFPLPDRMVPPDEHVFMLEIMGDSMIDAGILDKDYVIVKQQNTANNGEIVVAMTEDD
EATVKRFYKEDTHIRLQPENPTMEPIILQNVSILGKVIGVFRTVH

Nucleotide


Download         Length: 618 bp        

>NTDB_id=599209 NCL52_RS09685 WP_003238209.1 1922167..1922784(-) (dinR/lexA) [Bacillus subtilis strain N2-10]
ATGACGAAGCTATCAAAAAGGCAACTTGATATCCTCCGTTTTATTAAAGCAGAGGTTAAATCAAAAGGATATCCGCCTTC
CGTGAGAGAGATCGGAGAGGCTGTCGGGCTTGCGTCCAGTTCTACTGTCCACGGCCATTTGGCCCGCTTGGAAACAAAAG
GGCTGATCAGACGAGATCCGACAAAACCAAGAGCAATAGAAATTCTTGATGAAGAAGTAGACATTCCGCAAAGCCAGGTC
GTTAATGTACCGGTCATCGGGAAAGTCACGGCGGGATCTCCTATTACAGCAGTAGAAAATATTGAAGAATATTTTCCGCT
CCCTGACCGCATGGTTCCTCCAGACGAGCATGTATTTATGCTGGAGATTATGGGAGACAGTATGATAGATGCTGGTATTC
TCGATAAGGACTATGTCATCGTTAAACAGCAAAACACAGCGAACAATGGGGAAATTGTAGTTGCGATGACAGAAGATGAT
GAAGCAACTGTAAAACGATTCTATAAAGAGGATACCCACATTCGCTTGCAGCCTGAGAACCCAACGATGGAACCTATCAT
TTTGCAGAATGTCAGCATTCTAGGGAAAGTGATTGGCGTGTTCAGAACCGTCCATTAA

Domains

Predicted by InterProScan.

LexA DNA binding domain (LexA_DNA_bind)

(1-65)

Peptidase S24-like (Peptidase_S24)

(84-198)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NVV3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

100

100

1