Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   K5Q02_RS06355 Genome accession   NZ_CP081942
Coordinates   1417204..1417611 (+) Length   135 a.a.
NCBI ID   WP_225837490.1    Uniprot ID   -
Organism   Pseudomonas sp. MM211     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 1412204..1422611
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  K5Q02_RS06325 (K5Q02_06300) - 1412380..1413384 (-) 1005 WP_225837481.1 aspartate carbamoyltransferase catalytic subunit -
  K5Q02_RS06330 (K5Q02_06305) pyrR 1413381..1413902 (-) 522 WP_225837483.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  K5Q02_RS06335 (K5Q02_06310) ruvX 1413931..1414374 (-) 444 WP_225837485.1 Holliday junction resolvase RuvX -
  K5Q02_RS06340 (K5Q02_06315) - 1414374..1414943 (-) 570 WP_225837487.1 YqgE/AlgH family protein -
  K5Q02_RS06345 (K5Q02_06320) - 1415015..1415911 (-) 897 WP_225837488.1 energy transducer TonB -
  K5Q02_RS06350 (K5Q02_06325) gshB 1416013..1416975 (-) 963 WP_225839602.1 glutathione synthase -
  K5Q02_RS06355 (K5Q02_06330) pilG 1417204..1417611 (+) 408 WP_225837490.1 twitching motility response regulator PilG Regulator
  K5Q02_RS06360 (K5Q02_06335) pilH 1417660..1418025 (+) 366 WP_225837492.1 twitching motility response regulator PilH -
  K5Q02_RS06365 (K5Q02_06340) - 1418067..1418603 (+) 537 WP_225837494.1 chemotaxis protein CheW -
  K5Q02_RS06370 (K5Q02_06345) - 1418689..1420737 (+) 2049 WP_225837496.1 methyl-accepting chemotaxis protein -
  K5Q02_RS06375 (K5Q02_06350) - 1420807..1421655 (+) 849 WP_225839604.1 CheR family methyltransferase -

Sequence

Protein


Download         Length: 135 a.a.        Molecular weight: 14855.21 Da        Isoelectric Point: 7.2440

>NTDB_id=598556 K5Q02_RS06355 WP_225837490.1 1417204..1417611(+) (pilG) [Pseudomonas sp. MM211]
MEQHSEGLRVMVIDDSKTIRRTAETLLKKVGCEVITAVDGFDALAKIADTHPNIIFVDIMMPRLDGYQTCALIKNNSAFK
STPVIMLSSKDGLFDKAKGRIVGSDQYLTKPFSKEELLGAIKTHVPNFSPVEQAS

Nucleotide


Download         Length: 408 bp        

>NTDB_id=598556 K5Q02_RS06355 WP_225837490.1 1417204..1417611(+) (pilG) [Pseudomonas sp. MM211]
ATGGAACAGCATTCCGAAGGTTTGAGGGTGATGGTGATCGACGACTCGAAAACGATTCGTCGTACAGCGGAGACCTTGCT
GAAAAAGGTGGGTTGTGAAGTGATCACGGCGGTGGACGGCTTCGATGCCTTGGCGAAGATCGCCGACACCCATCCGAACA
TCATTTTCGTCGACATCATGATGCCGCGTCTCGATGGCTATCAGACCTGTGCCTTGATCAAGAACAACAGTGCCTTCAAA
TCCACGCCAGTTATCATGCTGTCGTCCAAGGATGGCCTGTTCGACAAGGCCAAGGGGCGCATTGTTGGGTCTGATCAATA
TTTGACCAAGCCCTTCAGCAAGGAAGAGCTGCTCGGCGCGATCAAGACCCATGTGCCGAATTTCTCACCGGTCGAACAAG
CATCGTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

76

92.593

0.704
  vicR Streptococcus mutans UA159

40.476

93.333

0.378