Detailed information NTG0598477

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: NBY12_RS01055
• Genome accession: NZ_CP098223
• Coordinates: 218400..219425 (-)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain Z0117EC0005
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 213400..224425

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NBY12_RS01030 (NBY12_01030)	rraA	213826..214311 (-)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
NBY12_RS01035 (NBY12_01035)	menA	214404..215330 (-)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
NBY12_RS01040 (NBY12_01040)	hslU	215397..216728 (-)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
NBY12_RS01045 (NBY12_01045)	hslV	216738..217268 (-)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
NBY12_RS01050 (NBY12_01050)	ftsN	217361..218308 (-)	948	WP_032304230.1	cell division protein FtsN	-
NBY12_RS01055 (NBY12_01055)	cytR	218400..219425 (-)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
NBY12_RS01060 (NBY12_01060)	priA	219581..221779 (-)	2199	WP_032304231.1	primosomal protein N'	Machinery gene
NBY12_RS01065 (NBY12_01065)	rpmE	221982..222194 (+)	213	WP_000710769.1	50S ribosomal protein L31	-
NBY12_RS01070 (NBY12_01070)	yiiX	222255..222863 (-)	609	WP_032304233.1	YiiX family permuted papain-like enzyme	-
NBY12_RS01075 (NBY12_01075)	metJ	222923..223240 (-)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=598477 NBY12_RS01055 WP_000644904.1 218400..219425(-) (cytR) [Escherichia coli strain Z0117EC0005]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=598477 NBY12_RS01055 WP_000644904.1 218400..219425(-) (cytR) [Escherichia coli strain Z0117EC0005]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTGAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTAGGTTATT
TGCCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGTACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGCTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTACCAACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTACGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCAATGCAACAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGTGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACGCGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628