Detailed information    

insolico Bioinformatically predicted

Overview

Name   eeP   Type   Regulator
Locus tag   K6K15_RS07450 Genome accession   NZ_CP081851
Coordinates   1534083..1535324 (-) Length   413 a.a.
NCBI ID   WP_305014667.1    Uniprot ID   -
Organism   Lacticaseibacillus paracasei strain XJ-003     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1529083..1540324
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  K6K15_RS07445 (K6K15_07410) - 1532331..1534058 (-) 1728 WP_305014666.1 proline--tRNA ligase -
  K6K15_RS07450 (K6K15_07415) eeP 1534083..1535324 (-) 1242 WP_305014667.1 RIP metalloprotease RseP Regulator
  K6K15_RS07455 (K6K15_07420) - 1535341..1536129 (-) 789 WP_003565800.1 phosphatidate cytidylyltransferase -
  K6K15_RS07460 (K6K15_07425) - 1536165..1536917 (-) 753 WP_305014668.1 isoprenyl transferase -
  K6K15_RS07465 (K6K15_07430) frr 1537470..1538027 (-) 558 WP_003598868.1 ribosome recycling factor -
  K6K15_RS07470 (K6K15_07435) pyrH 1538027..1538746 (-) 720 WP_003565806.1 UMP kinase -
  K6K15_RS07475 (K6K15_07440) tsf 1538982..1539863 (-) 882 WP_305014669.1 translation elongation factor Ts -

Sequence

Protein


Download         Length: 413 a.a.        Molecular weight: 45108.70 Da        Isoelectric Point: 8.0319

>NTDB_id=597748 K6K15_RS07450 WP_305014667.1 1534083..1535324(-) (eeP) [Lacticaseibacillus paracasei strain XJ-003]
MTTIIAFIVIFCILVVVHEFGHFYFAKRSGILVREFSIGMGPKLWASHKNNTTYTLRLLPLGGYVRMAGWQDEEDEIKPG
TMLSLILNDQGKVVRIDASDKTTLAGGMPVQVSRVDLVKDLVIEGYPNGDETALQTWQVDHDATIIEEDGTEVQIAPEDV
QFQNAPVWRRLLVNFAGPMNNFLLAILAFIIYGLFFGVQVLNTNQIGTVVPGYPAAEAGLKSNATVQTIDGQKMSSFTDL
SKIVSKNAGKSVTFTVKENGKSKNIVIKPNKEGKIGVEAHVDKSPANAIPFGFSQTWNLAVRTWDVLKSMVTGGFSLNKL
AGPVGIYTMTSQSAKGGIQGLLFFMGYLSLGLGITNLLPIPVLDGGKILLNLIEIIRRKPLKPETEGVVTMIGLGLMVLL
MLAVTINDIMRYF

Nucleotide


Download         Length: 1242 bp        

>NTDB_id=597748 K6K15_RS07450 WP_305014667.1 1534083..1535324(-) (eeP) [Lacticaseibacillus paracasei strain XJ-003]
ATGACCACTATCATCGCCTTTATCGTTATCTTCTGCATTCTTGTGGTAGTTCACGAGTTTGGCCATTTTTACTTTGCAAA
ACGCAGCGGCATTCTAGTCCGGGAATTTTCGATCGGTATGGGCCCGAAGCTGTGGGCGTCGCACAAGAACAATACGACCT
ACACGCTGCGGTTGCTACCACTTGGCGGATACGTCCGCATGGCTGGCTGGCAAGATGAGGAGGACGAGATTAAGCCCGGG
ACGATGCTGAGCCTGATTCTTAACGATCAAGGCAAGGTTGTCCGGATCGATGCCAGTGACAAAACGACTTTGGCCGGCGG
AATGCCTGTGCAAGTGAGTCGCGTCGATTTAGTTAAGGATCTGGTGATTGAAGGTTATCCAAACGGGGATGAAACAGCCT
TGCAAACTTGGCAGGTTGACCACGATGCGACGATCATTGAAGAAGACGGAACCGAGGTTCAGATCGCGCCAGAAGACGTT
CAGTTTCAAAACGCCCCGGTTTGGCGCCGGTTATTGGTCAACTTCGCCGGTCCGATGAATAACTTCTTACTCGCGATTCT
AGCTTTTATTATTTACGGTCTGTTTTTTGGTGTTCAGGTGCTCAATACCAACCAAATCGGAACAGTTGTGCCAGGTTATC
CAGCCGCAGAAGCTGGTCTTAAGTCCAATGCGACGGTGCAAACGATTGACGGTCAAAAAATGTCATCATTCACGGATCTT
TCAAAGATCGTCAGTAAAAATGCCGGTAAATCAGTGACATTTACTGTGAAGGAAAACGGTAAAAGCAAGAACATCGTGAT
CAAGCCGAATAAAGAAGGCAAGATCGGGGTTGAAGCACACGTCGATAAGTCCCCAGCAAATGCCATTCCTTTTGGCTTTT
CTCAAACTTGGAATTTGGCTGTCCGCACTTGGGACGTGCTCAAATCCATGGTGACCGGCGGTTTTTCACTCAATAAACTG
GCTGGCCCGGTTGGTATTTATACCATGACGAGTCAAAGTGCCAAAGGCGGTATTCAAGGATTACTCTTCTTTATGGGTTA
CTTGAGTCTCGGCTTAGGGATTACCAATTTGTTGCCGATTCCAGTGCTTGATGGTGGTAAAATTCTTTTGAACCTGATCG
AAATTATTCGCCGTAAGCCATTAAAACCGGAAACGGAAGGCGTTGTGACCATGATTGGCTTGGGCCTGATGGTTCTATTA
ATGCTAGCGGTCACAATCAACGATATCATGCGCTACTTTTAA

Domains

Predicted by InterproScan.

PDZ domain (PDZ_6)

(206-257)

Peptidase family M50 (Peptidase_M50)

(6-400)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

49.057

100

0.504
  eeP Streptococcus thermophilus LMD-9

48.821

100

0.501