Detailed information    

insolico Bioinformatically predicted

Overview

Name   sepM   Type   Regulator
Locus tag   K5P74_RS07425 Genome accession   NZ_CP081846
Coordinates   1491610..1492653 (-) Length   347 a.a.
NCBI ID   WP_222225396.1    Uniprot ID   A0AAW8T919
Organism   Enterococcus raffinosus strain CX012922     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context

Location: 1486610..1497653
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  K5P74_RS07405 (K5P74_07405) - 1488695..1489186 (-) 492 WP_010744907.1 ComE operon protein 2 -
  K5P74_RS07410 (K5P74_07410) - 1489312..1489452 (+) 141 WP_222225394.1 hypothetical protein -
  K5P74_RS07415 (K5P74_07415) - 1489555..1490640 (-) 1086 WP_261321614.1 MFS transporter -
  K5P74_RS07420 (K5P74_07420) comEA 1490900..1491505 (-) 606 WP_222225395.1 helix-hairpin-helix domain-containing protein Machinery gene
  K5P74_RS07425 (K5P74_07425) sepM 1491610..1492653 (-) 1044 WP_222225396.1 SepM family pheromone-processing serine protease Regulator
  K5P74_RS07430 (K5P74_07430) coaD 1492643..1493137 (-) 495 WP_010744912.1 pantetheine-phosphate adenylyltransferase -
  K5P74_RS07435 (K5P74_07435) rsmD 1493139..1493693 (-) 555 WP_010744913.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  K5P74_RS07440 (K5P74_07440) - 1493853..1494200 (-) 348 WP_028020682.1 YlbG family protein -
  K5P74_RS07445 (K5P74_07445) - 1494187..1494612 (-) 426 WP_222226887.1 YlbF family regulator -
  K5P74_RS07450 (K5P74_07450) - 1494614..1495720 (-) 1107 WP_222225397.1 CAP-associated domain-containing protein -

Sequence

Protein


Download         Length: 347 a.a.        Molecular weight: 38220.92 Da        Isoelectric Point: 6.8884

>NTDB_id=597712 K5P74_RS07425 WP_222225396.1 1491610..1492653(-) (sepM) [Enterococcus raffinosus strain CX012922]
MKNNKLVKRLLLIFLALAVVACVIVPIPYYIEEPGETINLKELITVNDKKDENKGSFSLTSVGIRRATVFTALKAKIEPF
HEIISADELTGGASDDEYMQIQKFNMETSQNFAIEQALKLANRPYKMEYKGVYVLGVEKNSNFAGKISVGDTVTKADGKT
FTSSEDFMKYVKSQKVGQKMKVTYTHDGKTKEATEKLIKLPTDKKPGIGITLTDHTEIDSQDKVKVDAGDIGGPSAGLMF
TLEIYEQLVDKDLRHGEKIAGTGTINSEGEVGRIGGIDKKVASASADKNKVFFAPDDEITKEMKEAQPGIKSNYEEAKAA
AKKLDTDMKIVPVKTVKDALEYLESMK

Nucleotide


Download         Length: 1044 bp        

>NTDB_id=597712 K5P74_RS07425 WP_222225396.1 1491610..1492653(-) (sepM) [Enterococcus raffinosus strain CX012922]
GTGAAAAATAATAAACTCGTCAAACGATTATTACTTATATTTTTAGCATTAGCAGTGGTGGCTTGTGTGATTGTACCGAT
TCCTTATTACATCGAGGAGCCAGGAGAGACAATCAATTTAAAAGAGTTGATTACAGTCAATGATAAAAAGGATGAAAACA
AAGGATCTTTTAGCTTAACCTCAGTTGGTATACGTCGAGCAACGGTTTTTACAGCTCTAAAAGCAAAAATTGAACCTTTT
CATGAAATTATTTCTGCTGATGAACTGACAGGCGGTGCTAGTGATGACGAATATATGCAGATTCAAAAATTCAATATGGA
AACGTCTCAAAATTTTGCAATTGAACAAGCTTTAAAATTAGCTAATAGACCTTATAAAATGGAGTACAAAGGGGTCTATG
TACTAGGTGTAGAGAAAAATTCAAATTTTGCTGGAAAAATTAGTGTTGGCGATACGGTTACAAAAGCAGATGGAAAAACA
TTTACCAGCAGCGAAGATTTTATGAAGTACGTAAAATCCCAAAAAGTCGGTCAAAAAATGAAAGTGACCTATACACATGA
TGGCAAAACAAAAGAAGCTACCGAGAAGTTGATTAAATTACCAACAGATAAAAAGCCCGGGATTGGAATTACTTTAACTG
ATCACACGGAGATTGACTCGCAGGATAAAGTGAAGGTGGATGCTGGTGATATCGGTGGACCTTCTGCTGGCTTAATGTTT
ACACTAGAAATTTATGAACAGCTCGTTGACAAGGATCTGCGTCACGGTGAGAAGATCGCTGGGACTGGAACGATTAATTC
TGAAGGAGAGGTCGGAAGAATTGGCGGGATTGATAAGAAGGTCGCTAGTGCATCGGCGGATAAAAATAAGGTCTTTTTCG
CTCCTGATGATGAGATTACAAAAGAAATGAAGGAAGCACAACCAGGTATTAAATCCAATTATGAAGAAGCCAAAGCAGCA
GCTAAAAAGCTGGATACAGATATGAAGATCGTTCCAGTGAAGACAGTGAAGGATGCTTTAGAGTATTTGGAATCAATGAA
ATAG

Domains

Predicted by InterProScan.

Lon protease (S16) C-terminal proteolytic domain (Lon_C)

(191-312)

PDZ domain (PDZ_2)

(128-194)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

49.275

99.424

0.49