Detailed information    

insolico Bioinformatically predicted

Overview

Name   letA   Type   Regulator
Locus tag   NBY72_RS19825 Genome accession   NZ_CP098036
Coordinates   3693138..3693512 (-) Length   124 a.a.
NCBI ID   WP_003227621.1    Uniprot ID   A0A9W5LLN9
Organism   Bacillus subtilis strain SPC-17-3     
Function   regulate competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 3688138..3698512
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NBY72_RS19795 (NBY72_19800) - 3688303..3688464 (-) 162 WP_003227632.1 hypothetical protein -
  NBY72_RS19800 (NBY72_19805) glpX 3688679..3689644 (-) 966 WP_014481197.1 class II fructose-bisphosphatase -
  NBY72_RS19805 (NBY72_19810) murAB 3689675..3690964 (-) 1290 WP_003227628.1 UDP-N-acetylglucosamine 1-carboxyvinyltransferase -
  NBY72_RS19810 (NBY72_19815) - 3691205..3691342 (-) 138 WP_014481198.1 hypothetical protein -
  NBY72_RS19815 (NBY72_19820) fsa 3691342..3691980 (-) 639 WP_003227626.1 fructose-6-phosphate aldolase -
  NBY72_RS19820 (NBY72_19825) fbaA 3692100..3692957 (-) 858 WP_003243339.1 class II fructose-bisphosphate aldolase -
  NBY72_RS19825 (NBY72_19830) letA 3693138..3693512 (-) 375 WP_003227621.1 sporulation initiation phosphotransferase Spo0F Regulator
  NBY72_RS19830 (NBY72_19835) ywjG 3693678..3694199 (+) 522 WP_014481199.1 DUF2529 domain-containing protein -
  NBY72_RS19835 (NBY72_19840) pyrG 3694281..3695888 (-) 1608 WP_003227612.1 glutamine hydrolyzing CTP synthase -
  NBY72_RS19840 (NBY72_19845) rpoE 3696130..3696636 (-) 507 WP_014481200.1 DNA-directed RNA polymerase subunit delta -
  NBY72_RS19845 (NBY72_19850) acdA 3696819..3697958 (-) 1140 WP_014481201.1 acyl-CoA dehydrogenase AcdA -

Sequence

Protein


Download         Length: 124 a.a.        Molecular weight: 14227.68 Da        Isoelectric Point: 4.6400

>NTDB_id=597293 NBY72_RS19825 WP_003227621.1 3693138..3693512(-) (letA) [Bacillus subtilis strain SPC-17-3]
MMNEKILIVDDQYGIRILLNEVFNKEGYQTFQAANGLQALDIVTKERPDLVLLDMKIPGMDGIEILKRMKVIDENIRVII
MTAYGELDMIQESKELGALTHFAKPFDIDEIRDAVKKYLPLKSN

Nucleotide


Download         Length: 375 bp        

>NTDB_id=597293 NBY72_RS19825 WP_003227621.1 3693138..3693512(-) (letA) [Bacillus subtilis strain SPC-17-3]
ATGATGAATGAAAAAATTTTAATCGTTGATGATCAATACGGCATTCGTATTTTGCTAAATGAAGTGTTCAATAAAGAAGG
CTACCAGACGTTTCAGGCTGCGAACGGCCTGCAGGCGCTTGACATTGTGACAAAAGAACGGCCCGACCTTGTGCTTTTGG
ACATGAAAATTCCCGGCATGGACGGAATCGAAATCTTAAAACGGATGAAGGTCATTGACGAAAACATCCGGGTCATTATC
ATGACGGCATACGGAGAGCTCGACATGATCCAAGAATCGAAGGAATTGGGCGCCCTGACGCACTTTGCCAAGCCGTTTGA
CATCGACGAAATCAGAGACGCCGTCAAAAAATATCTGCCCCTGAAGTCTAACTGA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(6-116)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A9W5LLN9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  letA Legionella pneumophila str. Paris

38.462

94.355

0.363
  letA Legionella pneumophila strain ERS1305867

38.462

94.355

0.363