Detailed information NTG0596818

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: NAG75_RS15355
• Genome accession: NZ_CP097873
• Coordinates: 3077104..3078111 (+)
• Length: 335 a.a.
• NCBI ID: WP_005481416.1
• Uniprot ID: -
• Organism: Vibrio parahaemolyticus strain GL-601
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 3072104..3083111

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NAG75_RS15335	rplC	3072638..3073267 (-)	630	WP_005456132.1	50S ribosomal protein L3	-
NAG75_RS15340	rpsJ	3073282..3073593 (-)	312	WP_004410492.1	30S ribosomal protein S10	-
NAG75_RS15345	rpmE	3074051..3074272 (-)	222	WP_005457203.1	50S ribosomal protein L31	-
NAG75_RS15350	priA	3074567..3076771 (+)	2205	WP_025789388.1	primosomal protein N'	Machinery gene
NAG75_RS15355	cytR	3077104..3078111 (+)	1008	WP_005481416.1	DNA-binding transcriptional regulator CytR	Regulator
NAG75_RS15360	ftsN	3078288..3078833 (+)	546	WP_005481405.1	cell division protein FtsN	-
NAG75_RS15365	hslV	3078998..3079549 (+)	552	WP_025789387.1	ATP-dependent protease subunit HslV	-
NAG75_RS15370	hslU	3079573..3080904 (+)	1332	WP_005489452.1	HslU--HslV peptidase ATPase subunit	-
NAG75_RS15375	-	3081329..3081553 (-)	225	WP_005489715.1	hypothetical protein	-
NAG75_RS15380	-	3081713..3081862 (-)	150	WP_005489496.1	AlpA family phage regulatory protein	-
NAG75_RS15385	radC	3082033..3082506 (+)	474	WP_005489555.1	DNA repair protein RadC	Machinery gene
NAG75_RS15390	-	3082503..3082934 (+)	432	WP_005489473.1	DUF2787 family protein	-

Sequence

Protein

• Length: 335 a.a.
• Molecular weight: 36835.35 Da
• Isoelectric Point: 6.4938

>NTDB_id=596818 NAG75_RS15355 WP_005481416.1 3077104..3078111(+) (cytR) [Vibrio parahaemolyticus strain GL-601]
MATMKDVAQLAGVSTATVSRALMNPEKVSSSTRKRVEDAVLEAGYSPNSLARNLRRNESKTIVTIVPDICDPYFSEIIRG
IEDAAMEHGYLVLLGDSGQQKKRESSFVNLVFTKQADGMLLLGTDLPFDVSKPEQKNLPPMVMACEFAPELELPTVHIDN
LTSAFEAVNYLTQLGHKRIAQISGPDTAVLCQFRQQGYQQALRRAGISKDPQYSVITEFSFDGGAKAVRKLLELPEPPTA
IFCHCDTMAIGAIQEAKRLGLRVPQDLSVVGFDDINFAQYCDPPLTTISQPRYEIGRQAMLMMLELLKGHDVHSGSRLLE
TKLVVRGSAAPPQRA

Nucleotide

• Length: 1008 bp

>NTDB_id=596818 NAG75_RS15355 WP_005481416.1 3077104..3078111(+) (cytR) [Vibrio parahaemolyticus strain GL-601]
ATGGCGACAATGAAGGATGTTGCCCAGCTTGCGGGAGTGTCGACAGCTACGGTATCTCGAGCATTAATGAATCCAGAAAA
AGTCTCTTCTTCAACAAGAAAAAGAGTCGAAGATGCCGTCCTTGAAGCGGGCTATTCTCCAAATTCATTAGCGCGTAATC
TACGTAGAAACGAATCAAAAACGATTGTTACCATCGTTCCTGACATCTGTGATCCTTACTTTTCTGAAATCATTCGTGGT
ATCGAAGACGCCGCTATGGAACATGGCTACCTCGTACTGCTCGGTGACAGCGGCCAGCAGAAAAAGCGTGAAAGCTCGTT
TGTGAATCTAGTGTTCACCAAACAAGCCGATGGCATGTTACTGCTTGGTACCGACCTGCCATTTGATGTCAGCAAGCCAG
AACAGAAAAACCTGCCACCAATGGTCATGGCTTGTGAGTTTGCGCCAGAGCTAGAATTACCAACCGTGCACATTGACAAC
CTAACGTCTGCTTTTGAAGCGGTCAATTACCTAACTCAACTTGGCCATAAACGCATAGCACAAATTTCAGGGCCAGACAC
AGCGGTATTGTGCCAGTTCCGCCAGCAAGGTTATCAACAAGCCTTGCGTCGCGCGGGGATCAGTAAAGACCCACAATACA
GTGTTATCACTGAGTTTTCTTTTGACGGCGGCGCGAAAGCTGTACGTAAGTTGCTAGAACTTCCAGAGCCACCAACTGCG
ATTTTCTGCCACTGTGACACCATGGCAATCGGCGCAATCCAAGAAGCGAAACGACTCGGTCTGCGTGTTCCACAAGATCT
GTCGGTGGTTGGTTTCGATGATATCAACTTTGCTCAATACTGCGATCCACCGTTAACGACCATTTCTCAACCTCGTTATG
AAATTGGCCGCCAAGCGATGCTTATGATGCTCGAACTCCTTAAAGGCCATGACGTTCATTCAGGTTCACGCTTACTAGAA
ACTAAGCTTGTTGTCCGTGGTAGCGCAGCGCCACCGCAACGCGCCTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (3-48)

• Periplasmic binding protein-like domain (Peripla_BP_3) (168-328)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	100	100	1
cytR	Vibrio cholerae C6706	90.719	99.701	0.904