Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   K5K96_RS10520 Genome accession   NZ_CP081472
Coordinates   2022206..2023486 (-) Length   426 a.a.
NCBI ID   WP_227276733.1    Uniprot ID   -
Organism   Vagococcus fluvialis strain 12B2     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 2017206..2028486
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  K5K96_RS10515 (K5K96_10470) - 2020474..2022174 (-) 1701 WP_227275941.1 proline--tRNA ligase -
  K5K96_RS10520 (K5K96_10475) eeP 2022206..2023486 (-) 1281 WP_227276733.1 RIP metalloprotease RseP Regulator
  K5K96_RS10525 (K5K96_10480) - 2023520..2024308 (-) 789 WP_227275942.1 phosphatidate cytidylyltransferase -
  K5K96_RS10530 (K5K96_10485) - 2024323..2025102 (-) 780 WP_207059707.1 isoprenyl transferase -
  K5K96_RS10535 (K5K96_10490) frr 2025270..2025827 (-) 558 WP_086342922.1 ribosome recycling factor -
  K5K96_RS10540 (K5K96_10495) pyrH 2025829..2026551 (-) 723 WP_086342921.1 UMP kinase -
  K5K96_RS10545 (K5K96_10500) tsf 2026680..2027561 (-) 882 WP_086342920.1 translation elongation factor Ts -
  K5K96_RS10550 (K5K96_10505) rpsB 2027693..2028475 (-) 783 WP_086342919.1 30S ribosomal protein S2 -

Sequence


Protein


Download         Length: 426 a.a.        Molecular weight: 46466.20 Da        Isoelectric Point: 5.7402

>NTDB_id=596712 K5K96_RS10520 WP_227276733.1 2022206..2023486(-) (eeP) [Vagococcus fluvialis strain 12B2]
MSTIVTFIFVFGIIVLVHEFGHFIFAKRGGILVREFAIGMGPKLFHHRKNETTYTIRMLPIGGYVRMAGEGEEEVELAPG
MPVSLVLDENGVVVKINPNKKVQLPNSIPVEVIKHDLVDDLYITGFENGDDSLEKRFTVAHDATIIEEDGLETQIAPRDV
QFQSASLGRRMMTNFAGPMNNFILSFILFTIVAFMLGGSYKPDNSSTIGGVVQDGVAQKAGIKAGEKIIEANGKKIETFN
ELSEVITPNVGKKVTLVVEDSNKKTRNVDVTPVESAEGTKQGIIGIQSGTVLTELSFFEKIKYGITETFANSLMIFKALG
NLVTDFSLNKLGGPVMIFKASEAVSNSGFIAILSFTAMLSVNLGIMNLVPIPGLDGGKLALNIFEGVRGKPLSQEKEVMI
TMIGVGILLLLMIAVTWNDIQRFFIR

Nucleotide


Download         Length: 1281 bp        

>NTDB_id=596712 K5K96_RS10520 WP_227276733.1 2022206..2023486(-) (eeP) [Vagococcus fluvialis strain 12B2]
ATAAGTACTATAGTCACATTTATTTTTGTTTTCGGGATTATTGTCCTAGTTCATGAATTTGGACATTTTATCTTCGCAAA
ACGTGGTGGTATTTTAGTTAGGGAATTTGCCATAGGTATGGGTCCAAAACTTTTTCATCATCGTAAAAATGAAACAACTT
ATACAATTCGAATGTTGCCAATTGGAGGGTATGTTCGAATGGCTGGTGAAGGGGAGGAAGAAGTAGAACTTGCACCGGGG
ATGCCTGTTTCTTTAGTGTTAGATGAAAATGGGGTTGTCGTTAAGATTAACCCGAATAAAAAAGTTCAATTACCTAACAG
TATTCCTGTTGAAGTAATTAAACATGATTTAGTAGATGACTTGTATATTACGGGGTTTGAAAATGGTGATGATTCATTAG
AAAAACGATTCACTGTTGCTCATGATGCGACAATTATTGAAGAGGATGGTCTTGAAACACAGATTGCACCAAGAGATGTT
CAGTTCCAATCAGCCTCTTTAGGCCGTAGAATGATGACTAACTTTGCAGGTCCAATGAATAATTTTATTTTGTCATTTAT
ATTATTCACAATCGTTGCTTTTATGCTAGGTGGAAGCTATAAACCTGATAATTCAAGTACCATTGGTGGAGTAGTCCAAG
ATGGAGTCGCTCAAAAAGCTGGTATTAAAGCTGGCGAAAAAATTATTGAAGCAAATGGTAAAAAAATTGAAACATTTAAC
GAGCTATCAGAAGTTATCACACCAAATGTTGGTAAAAAAGTAACTTTAGTTGTAGAAGATAGTAACAAGAAGACAAGGAA
TGTTGATGTAACACCTGTTGAAAGTGCAGAGGGTACTAAACAAGGTATTATCGGTATCCAAAGTGGCACCGTCCTTACTG
AGTTATCATTCTTTGAGAAGATTAAATACGGTATTACGGAAACTTTCGCTAATTCATTAATGATTTTTAAAGCTCTAGGT
AATTTAGTGACAGATTTTAGCTTAAATAAATTAGGTGGACCAGTCATGATTTTTAAAGCCTCAGAAGCAGTTTCTAATAG
TGGCTTTATTGCTATTTTATCGTTCACTGCTATGTTATCTGTCAACTTAGGAATTATGAACTTAGTACCTATTCCAGGGT
TAGACGGAGGAAAATTAGCTTTAAATATTTTTGAAGGTGTCCGTGGAAAACCTCTAAGTCAAGAAAAAGAAGTAATGATC
ACAATGATAGGTGTTGGTATCCTATTATTATTAATGATTGCAGTGACTTGGAATGATATTCAAAGGTTCTTTATTCGTTA
A

Domains


Predicted by InterproScan.

(6-411)

(208-259)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMD-9

47.907

100

0.484

  eeP Streptococcus thermophilus LMG 18311

47.674

100

0.481