Detailed information NTG0059671

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: BJAB07104_RS10770
• Genome accession: NC_021726
• Coordinates: 2220139..2220840 (-)
• Length: 233 a.a.
• NCBI ID: WP_000594589.1
• Uniprot ID: A0A9P3CZ31
• Organism: Acinetobacter baumannii BJAB07104
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2215139..2225840

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BJAB07104_RS10740 (BJAB07104_02135)	-	2215446..2215889 (-)	444	WP_001246675.1	SRPBCC family protein	-
BJAB07104_RS10745 (BJAB07104_02136)	tadA	2215959..2216462 (-)	504	WP_000033178.1	tRNA adenosine(34) deaminase TadA	-
BJAB07104_RS10750 (BJAB07104_02137)	-	2216469..2217593 (-)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
BJAB07104_RS10755 (BJAB07104_02138)	ung	2217590..2218303 (-)	714	WP_001177528.1	uracil-DNA glycosylase	-
BJAB07104_RS10760 (BJAB07104_02139)	-	2218354..2218950 (-)	597	WP_000908452.1	6-carboxytetrahydropterin synthase	-
BJAB07104_RS10765 (BJAB07104_02141)	gspK	2219181..2220139 (-)	959	Protein_2124	type II secretion system minor pseudopilin GspK	-
BJAB07104_RS10770 (BJAB07104_02142)	xcpW	2220139..2220840 (-)	702	WP_000594589.1	type II secretion system minor pseudopilin GspJ	Machinery gene
BJAB07104_RS10775 (BJAB07104_02143)	xcpV	2220840..2221220 (-)	381	WP_000836911.1	type II secretion system minor pseudopilin GspI	Machinery gene
BJAB07104_RS10780 (BJAB07104_02144)	-	2221210..2221764 (-)	555	WP_000841373.1	type II secretion system protein	-
BJAB07104_RS10785 (BJAB07104_02145)	-	2221774..2222382 (-)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
BJAB07104_RS10790 (BJAB07104_02146)	-	2222420..2223193 (-)	774	WP_000497298.1	TatD family hydrolase	-
BJAB07104_RS10795 (BJAB07104_02147)	-	2223211..2223552 (-)	342	WP_001183024.1	PilZ domain-containing protein	-
BJAB07104_RS10800 (BJAB07104_02148)	-	2223564..2224544 (-)	981	WP_001075411.1	DNA polymerase III subunit delta'	-
BJAB07104_RS10805 (BJAB07104_02149)	kdsB	2224556..2225317 (-)	762	WP_000680697.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26639.58 Da
• Isoelectric Point: 9.3468

>NTDB_id=59671 BJAB07104_RS10770 WP_000594589.1 2220139..2220840(-) (xcpW) [Acinetobacter baumannii BJAB07104]
MIKNKYIHIRSIDSRLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=59671 BJAB07104_RS10770 WP_000594589.1 2220139..2220840(-) (xcpW) [Acinetobacter baumannii BJAB07104]
ATGATAAAAAATAAATATATTCACATCCGAAGCATTGATTCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGTCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGCAAAGCAGGCGTAACGGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGACCAAAAAAAATTATATCGTCTTAAATATACAAATTTGAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCGCAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.571	100	0.996