Detailed information
Bioinformatically predicted
Overview
| Name | xcpV | Type | Machinery gene |
| Locus tag | BJAB07104_RS10775 | Genome accession | NC_021726 |
| Coordinates | 2220840..2221220 (-) | Length | 126 a.a. |
| NCBI ID | WP_000836911.1 | Uniprot ID | - |
| Organism | Acinetobacter baumannii BJAB07104 | ||
| Function | pseudopilus assembly (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2215840..2226220
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BJAB07104_RS10745 (BJAB07104_02136) | tadA | 2215959..2216462 (-) | 504 | WP_000033178.1 | tRNA adenosine(34) deaminase TadA | - |
| BJAB07104_RS10750 (BJAB07104_02137) | - | 2216469..2217593 (-) | 1125 | WP_001983908.1 | enoyl-CoA hydratase/isomerase family protein | - |
| BJAB07104_RS10755 (BJAB07104_02138) | ung | 2217590..2218303 (-) | 714 | WP_001177528.1 | uracil-DNA glycosylase | - |
| BJAB07104_RS10760 (BJAB07104_02139) | - | 2218354..2218950 (-) | 597 | WP_000908452.1 | 6-carboxytetrahydropterin synthase | - |
| BJAB07104_RS10765 (BJAB07104_02141) | gspK | 2219181..2220139 (-) | 959 | Protein_2124 | type II secretion system minor pseudopilin GspK | - |
| BJAB07104_RS10770 (BJAB07104_02142) | xcpW | 2220139..2220840 (-) | 702 | WP_000594589.1 | type II secretion system minor pseudopilin GspJ | Machinery gene |
| BJAB07104_RS10775 (BJAB07104_02143) | xcpV | 2220840..2221220 (-) | 381 | WP_000836911.1 | type II secretion system minor pseudopilin GspI | Machinery gene |
| BJAB07104_RS10780 (BJAB07104_02144) | - | 2221210..2221764 (-) | 555 | WP_000841373.1 | type II secretion system protein | - |
| BJAB07104_RS10785 (BJAB07104_02145) | - | 2221774..2222382 (-) | 609 | WP_000375838.1 | TetR/AcrR family transcriptional regulator | - |
| BJAB07104_RS10790 (BJAB07104_02146) | - | 2222420..2223193 (-) | 774 | WP_000497298.1 | TatD family hydrolase | - |
| BJAB07104_RS10795 (BJAB07104_02147) | - | 2223211..2223552 (-) | 342 | WP_001183024.1 | PilZ domain-containing protein | - |
| BJAB07104_RS10800 (BJAB07104_02148) | - | 2223564..2224544 (-) | 981 | WP_001075411.1 | DNA polymerase III subunit delta' | - |
| BJAB07104_RS10805 (BJAB07104_02149) | kdsB | 2224556..2225317 (-) | 762 | WP_000680697.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
Sequence
Protein
Download Length: 126 a.a. Molecular weight: 13975.20 Da Isoelectric Point: 9.8004
>NTDB_id=59672 BJAB07104_RS10775 WP_000836911.1 2220840..2221220(-) (xcpV) [Acinetobacter baumannii BJAB07104]
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHMVFFNYPVKAK
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHMVFFNYPVKAK
Nucleotide
Download Length: 381 bp
>NTDB_id=59672 BJAB07104_RS10775 WP_000836911.1 2220840..2221220(-) (xcpV) [Acinetobacter baumannii BJAB07104]
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAATTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACCCAGAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACTCATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAATTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACCCAGAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACTCATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| xcpV | Acinetobacter baumannii D1279779 |
100 |
100 |
1 |