Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   K5K97_RS12225 Genome accession   NZ_CP081470
Coordinates   2406290..2407558 (+) Length   422 a.a.
NCBI ID   WP_167800014.1    Uniprot ID   -
Organism   Vagococcus fluvialis strain 25B2     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 2401290..2412558
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  K5K97_RS12195 (K5K97_12180) rpsB 2401301..2402083 (+) 783 WP_086342919.1 30S ribosomal protein S2 -
  K5K97_RS12200 (K5K97_12185) tsf 2402215..2403096 (+) 882 WP_086342920.1 translation elongation factor Ts -
  K5K97_RS12205 (K5K97_12190) pyrH 2403225..2403947 (+) 723 WP_086342921.1 UMP kinase -
  K5K97_RS12210 (K5K97_12195) frr 2403949..2404506 (+) 558 WP_086342922.1 ribosome recycling factor -
  K5K97_RS12215 (K5K97_12200) - 2404674..2405453 (+) 780 WP_227288871.1 isoprenyl transferase -
  K5K97_RS12220 (K5K97_12205) - 2405468..2406256 (+) 789 WP_227288872.1 phosphatidate cytidylyltransferase -
  K5K97_RS12225 (K5K97_12210) eeP 2406290..2407558 (+) 1269 WP_167800014.1 RIP metalloprotease RseP Regulator
  K5K97_RS12230 (K5K97_12215) - 2407590..2409290 (+) 1701 WP_227288873.1 proline--tRNA ligase -

Sequence


Protein


Download         Length: 422 a.a.        Molecular weight: 46312.08 Da        Isoelectric Point: 5.1935

>NTDB_id=596683 K5K97_RS12225 WP_167800014.1 2406290..2407558(+) (eeP) [Vagococcus fluvialis strain 25B2]
MSTIVTFIFVFGIIVLVHEFGHFIFAKRGGILVREFAIGMGPKLFHHRKNETTYTIRMLPIGGYVRMAGEGEEEVELAPG
MPVSLVLDENGVVVKINPNKKVQLPNSIPVEVIKHDLVDDLYITGFENGDDSLEKRFTVAHDATIIEEDGLETQIAPRDV
QFQSASLGRRMMTNFAGPMNNFILSFILFTIVAFMLGGIYQNSNTLGKIVEGSVAEKAGLVEGDKIVEINGKKTSTFEEV
SAGIMPNANKEITLLVKDTTGKEKEITVTPEPAKDNPEQGVLGFGREFKELTILEKFKYGITETFANSLMIFKALGNLVT
DFSLNKLGGPVMIFKASEAVSNSGFIAILSFTAMLSVNLGIMNLIPIPGLDGGKLALNIFEGVRGKPLSQEKEVMITMIG
VGILLLLMIAVTWNDIQRFFIR

Nucleotide


Download         Length: 1269 bp        

>NTDB_id=596683 K5K97_RS12225 WP_167800014.1 2406290..2407558(+) (eeP) [Vagococcus fluvialis strain 25B2]
ATAAGTACTATAGTCACATTTATTTTTGTTTTCGGGATTATTGTCTTAGTTCATGAATTTGGACATTTTATCTTTGCAAA
ACGTGGTGGTATTTTAGTTAGGGAATTTGCCATAGGTATGGGTCCAAAACTTTTTCATCATCGTAAAAATGAAACAACTT
ATACAATTCGAATGTTACCAATTGGAGGGTATGTTCGAATGGCTGGTGAAGGGGAGGAAGAAGTAGAACTTGCACCAGGT
ATGCCTGTTTCTTTAGTGTTAGATGAAAATGGGGTTGTCGTTAAGATTAACCCGAATAAAAAAGTTCAATTACCTAACAG
TATTCCAGTTGAAGTAATTAAACATGATTTAGTGGATGACTTGTATATTACCGGGTTTGAAAATGGTGATGATTCATTAG
AAAAACGATTCACTGTTGCTCATGATGCGACAATTATTGAAGAGGATGGTCTTGAAACGCAGATTGCGCCAAGAGATGTT
CAGTTCCAATCAGCCTCTTTAGGCCGTAGAATGATGACTAACTTTGCAGGTCCAATGAATAACTTTATTTTGTCATTTAT
ATTATTCACAATCGTTGCTTTTATGCTAGGTGGTATCTATCAAAATTCTAATACACTTGGAAAAATTGTGGAAGGAAGTG
TAGCTGAAAAAGCAGGCTTAGTTGAAGGCGATAAGATTGTAGAGATAAATGGCAAAAAAACTTCTACTTTTGAAGAAGTA
TCAGCAGGTATTATGCCAAATGCTAACAAAGAAATTACTTTACTTGTCAAAGATACAACAGGTAAAGAAAAAGAAATAAC
AGTAACACCTGAACCCGCTAAAGATAATCCAGAGCAAGGTGTTTTAGGATTTGGTCGTGAGTTTAAAGAACTTACGATTT
TAGAAAAATTTAAATACGGTATTACGGAAACTTTCGCTAATTCATTAATGATTTTTAAAGCTCTAGGTAATTTAGTGACA
GATTTTAGCTTAAATAAATTAGGTGGACCAGTCATGATTTTTAAAGCCTCAGAAGCAGTTTCTAATAGTGGCTTTATTGC
TATTTTATCGTTCACTGCTATGTTATCTGTCAACTTAGGAATTATGAACTTAATACCTATTCCAGGGTTAGACGGAGGAA
AATTAGCTTTAAATATTTTTGAAGGTGTCCGTGGAAAACCTCTAAGTCAAGAAAAAGAAGTAATGATCACAATGATAGGT
GTTGGTATCCTATTATTATTAATGATTGCAGTGACTTGGAATGATATTCAAAGGTTCTTTATTCGTTAA

Domains


Predicted by InterproScan.

(209-257)

(6-407)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

47.653

100

0.481

  eeP Streptococcus thermophilus LMD-9

47.653

100

0.481