Detailed information    

insolico Bioinformatically predicted

Overview

Name   recR   Type   Machinery gene
Locus tag   M9H69_RS02850 Genome accession   NZ_CP097843
Coordinates   521638..522234 (+) Length   198 a.a.
NCBI ID   WP_000966754.1    Uniprot ID   A0A1X1J688
Organism   Streptococcus oralis strain HP01     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 516638..527234
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  M9H69_RS02830 (M9H69_02830) - 516643..517560 (+) 918 WP_250315841.1 dihydrodipicolinate synthase family protein -
  M9H69_RS02835 (M9H69_02835) - 517578..518462 (+) 885 WP_250315842.1 ROK family protein -
  M9H69_RS02840 (M9H69_02840) - 518478..519329 (-) 852 WP_250315843.1 MurR/RpiR family transcriptional regulator -
  M9H69_RS02845 (M9H69_02845) pbp2b 519585..521627 (+) 2043 WP_250315844.1 penicillin-binding protein PBP2B -
  M9H69_RS02850 (M9H69_02850) recR 521638..522234 (+) 597 WP_000966754.1 recombination mediator RecR Machinery gene
  M9H69_RS02855 (M9H69_02855) - 522540..522815 (+) 276 WP_250315845.1 TIGR04197 family type VII secretion effector -
  M9H69_RS02860 (M9H69_02860) - 522819..523175 (+) 357 WP_250315846.1 hypothetical protein -
  M9H69_RS02865 (M9H69_02865) - 523166..524824 (+) 1659 WP_250315847.1 LXG domain-containing protein -
  M9H69_RS02870 (M9H69_02870) - 524814..525446 (+) 633 WP_084920143.1 hypothetical protein -
  M9H69_RS02875 (M9H69_02875) - 525628..527153 (+) 1526 Protein_514 virulence protein -

Sequence

Protein


Download         Length: 198 a.a.        Molecular weight: 21732.87 Da        Isoelectric Point: 4.4927

>NTDB_id=596587 M9H69_RS02850 WP_000966754.1 521638..522234(+) (recR) [Streptococcus oralis strain HP01]
MLYPTPIAKLIDSYSKLPGIGIKTATRLAFYTIGMSDDDVNEFAKNLLSAKRELTYCSICGRLTDDDPCSICTDPTRDQT
TILVLEDSRDVAAMENIQEYHGLYHVLHGLISPMNGISPDDINLKSLMTRLMDSEVSEVIVATNATADGEATSMYLSRLL
KPAGIKVTRLARGLAVGADIEYADEVTLLRAIENRTEL

Nucleotide


Download         Length: 597 bp        

>NTDB_id=596587 M9H69_RS02850 WP_000966754.1 521638..522234(+) (recR) [Streptococcus oralis strain HP01]
ATGCTGTATCCAACACCTATTGCCAAGTTAATTGATAGTTATTCGAAGCTTCCAGGTATCGGGATCAAAACGGCTACTCG
TCTCGCCTTCTATACCATTGGAATGTCTGATGACGATGTCAATGAATTTGCAAAAAATCTCCTATCTGCCAAGCGGGAAT
TGACCTATTGTTCCATCTGTGGTCGCTTGACCGATGATGATCCCTGCTCTATCTGCACAGATCCGACTCGAGACCAGACA
ACGATCTTGGTGCTAGAGGATAGTCGCGATGTGGCTGCTATGGAAAATATCCAAGAATACCATGGACTCTATCATGTCTT
GCATGGACTCATTTCTCCTATGAATGGTATCAGCCCAGACGATATCAACCTCAAGAGTCTCATGACCCGTCTCATGGATA
GTGAGGTTTCAGAGGTGATCGTGGCAACCAATGCGACAGCAGATGGAGAAGCGACATCTATGTATCTCTCTCGTTTGCTC
AAACCAGCTGGTATCAAAGTCACTCGTCTAGCACGAGGACTAGCCGTGGGAGCAGATATCGAGTATGCGGATGAGGTCAC
ACTCTTACGAGCCATTGAAAATCGGACAGAGTTGTAG

Domains

Predicted by InterProScan.

RecR protein (RecR_ZnF)

(39-78)

Toprim domain (Toprim_4)

(81-171)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A1X1J688

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recR Streptococcus pneumoniae R6

99.495

100

0.995
  recR Bacillus subtilis subsp. subtilis str. 168

62.121

100

0.621
  recR Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539

49.231

98.485

0.485