Detailed information    

insolico Bioinformatically predicted

Overview


Name   amiE   Type   Regulator
Locus tag   M9H69_RS01670 Genome accession   NZ_CP097843
Coordinates   299973..301040 (+) Length   355 a.a.
NCBI ID   WP_000159803.1    Uniprot ID   A0A3R8NED6
Organism   Streptococcus oralis strain HP01     
Function   internalize XIP (predicted from homology)   
Competence regulation

Genomic Context


Location: 294973..306040
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  M9H69_RS01655 (M9H69_01655) amiA3 295499..297475 (+) 1977 WP_250315738.1 peptide ABC transporter substrate-binding protein Regulator
  M9H69_RS01660 (M9H69_01660) amiC 297542..299038 (+) 1497 WP_221161208.1 ABC transporter permease Regulator
  M9H69_RS01665 (M9H69_01665) amiD 299038..299964 (+) 927 WP_000103693.1 oligopeptide ABC transporter permease OppC Regulator
  M9H69_RS01670 (M9H69_01670) amiE 299973..301040 (+) 1068 WP_000159803.1 ABC transporter ATP-binding protein Regulator
  M9H69_RS01675 (M9H69_01675) - 301051..301980 (+) 930 WP_001291313.1 ATP-binding cassette domain-containing protein -
  M9H69_RS01680 (M9H69_01680) - 302069..303508 (-) 1440 WP_001043438.1 TrkH family potassium uptake protein -
  M9H69_RS01685 (M9H69_01685) trkA 303512..304861 (-) 1350 WP_250315739.1 Trk system potassium transporter TrkA -
  M9H69_RS01690 (M9H69_01690) - 305263..305766 (+) 504 WP_007522363.1 tRNA (cytidine(34)-2'-O)-methyltransferase -

Sequence


Protein


Download         Length: 355 a.a.        Molecular weight: 39629.25 Da        Isoelectric Point: 4.6065

>NTDB_id=596579 M9H69_RS01670 WP_000159803.1 299973..301040(+) (amiE) [Streptococcus oralis strain HP01]
MTKESNVILTARDIVVEFDVRDKVLTAIRGVSLELIEGEVLALVGESGSGKSVLTKTFTGMLEDNGRIAQGSIDYRGQDL
TALTSNKEWEKIRGAKIATIFQDPMTSLDPINTIGSQITEVIVKHQGKTAKEAKEMAIDYMNKVGIPDAEKRFDEYPFQY
SGGMRQRIVIAIALACRPDILICDEPTTALDVTIQAQIIDLLKTLQNEYHFTIIFITHDLGVVASIADKVAVMYAGEIVE
YGTVEEVFYDPRHPYTWSLLSSLPQLADDKGELYSIPGTPPSLYTELKGDAFALRSDYAMQIDFEQKAPQFSVTDTHWAK
TWLLHENAPKVEKPEIIADLHDKIRDKMGFAHLED

Nucleotide


Download         Length: 1068 bp        

>NTDB_id=596579 M9H69_RS01670 WP_000159803.1 299973..301040(+) (amiE) [Streptococcus oralis strain HP01]
ATGACAAAAGAAAGTAATGTAATTTTGACTGCTCGCGATATCGTCGTGGAATTTGACGTTCGTGACAAGGTTCTGACGGC
TATCAGAGGCGTTTCTCTAGAACTGATTGAAGGAGAAGTTCTTGCCTTGGTAGGTGAGTCTGGTTCTGGTAAATCTGTAT
TAACAAAAACCTTTACAGGGATGTTAGAAGACAATGGGCGCATTGCCCAAGGAAGCATCGATTATCGTGGACAAGACTTG
ACAGCCTTGACTTCAAACAAAGAGTGGGAGAAAATCCGTGGTGCTAAAATTGCGACCATCTTCCAAGACCCAATGACAAG
TTTGGATCCAATTAATACAATCGGTAGCCAAATCACAGAAGTTATCGTTAAACACCAAGGGAAAACAGCTAAGGAAGCCA
AAGAAATGGCAATCGACTATATGAACAAGGTTGGAATTCCAGACGCTGAAAAACGTTTTGACGAGTATCCTTTCCAATAT
TCTGGAGGGATGCGCCAACGTATCGTTATTGCGATTGCCCTTGCCTGTCGTCCAGATATCTTGATCTGTGACGAGCCAAC
AACGGCTCTTGATGTAACCATTCAAGCACAAATCATTGATTTGCTTAAAACCTTGCAAAATGAGTACCACTTTACTATTA
TCTTTATCACCCATGACCTTGGTGTGGTAGCAAGTATTGCGGATAAGGTAGCGGTTATGTATGCTGGTGAAATTGTAGAA
TACGGTACTGTTGAGGAAGTCTTCTACGACCCACGTCATCCATATACTTGGAGTCTCTTGTCTAGCTTGCCTCAGCTTGC
TGACGATAAAGGGGAATTGTACTCTATCCCAGGAACACCACCGTCTCTTTATACTGAGTTGAAAGGTGATGCCTTTGCCC
TTCGTTCAGATTATGCGATGCAAATTGACTTTGAACAGAAAGCGCCTCAGTTTTCAGTCACTGATACTCACTGGGCTAAG
ACTTGGTTGCTTCATGAGAATGCTCCTAAGGTTGAAAAACCAGAAATCATCGCAGATTTACATGATAAAATTCGTGATAA
AATGGGCTTTGCTCATCTAGAAGACTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A3R8NED6

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiE Streptococcus salivarius strain HSISS4

85.634

100

0.856

  amiE Streptococcus thermophilus LMG 18311

83.662

100

0.837

  amiE Streptococcus thermophilus LMD-9

83.662

100

0.837

  oppD Streptococcus mutans UA159

54.545

99.155

0.541