Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   AW27_RS14345 Genome accession   NZ_CP097800
Coordinates   3344028..3345152 (+) Length   374 a.a.
NCBI ID   WP_037921241.1    Uniprot ID   -
Organism   Streptomyces sp. PCS3-D2 isolate P1     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 3339028..3350152
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AW27_RS14330 (AW27_014310) - 3339324..3340211 (+) 888 WP_037921247.1 hypothetical protein -
  AW27_RS14335 (AW27_014315) - 3340330..3342096 (-) 1767 WP_037921246.1 sigma-70 family RNA polymerase sigma factor -
  AW27_RS14340 (AW27_014320) radA/sms 3342279..3343721 (+) 1443 WP_037921243.1 DNA repair protein RadA Machinery gene
  AW27_RS14345 (AW27_014325) disA 3344028..3345152 (+) 1125 WP_037921241.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  AW27_RS14350 (AW27_014330) - 3345269..3346072 (-) 804 WP_037921239.1 hypothetical protein -
  AW27_RS14355 (AW27_014335) - 3346233..3346886 (+) 654 WP_106967579.1 phosphatase PAP2 family protein -
  AW27_RS14360 (AW27_014340) - 3346883..3347848 (+) 966 WP_037921238.1 A/G-specific adenine glycosylase -
  AW27_RS14365 (AW27_014345) - 3348123..3348689 (+) 567 WP_037921236.1 SigE family RNA polymerase sigma factor -
  AW27_RS14370 (AW27_014350) - 3348755..3349387 (+) 633 WP_037921601.1 hypothetical protein -
  AW27_RS14375 (AW27_014355) cseB 3349422..3350135 (+) 714 WP_037921234.1 two-component system response regulator CseB -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40391.34 Da        Isoelectric Point: 5.0260

>NTDB_id=596514 AW27_RS14345 WP_037921241.1 3344028..3345152(+) (disA) [Streptomyces sp. PCS3-D2 isolate P1]
MAAKDGASAPGKSGASSRHDALMRASLSAVAPGQPLRDGLERIVRGNTGGLIVLGMDKAVEAMCTGGFVLDVEFTATRLR
ELCKLDGALILDKDLTKILRAGVQLVPDASIPTEETGTRHRTADRVSKQCGFPVVSVSQSMRLIALYVDGERRVLEESGA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVTAVAQRLEMVRRIATEIAEYVVELGTDGRLLSLQLDELTV
GIEQERELVIRDYVPEPTAKRSRTVDEALAELDALTHPELLELPIVARALGYTGSPETLDSAVSPRGYRLLAKVPRLPGA
IIERLVEHFGGLQKLLAASVDDLQAVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=596514 AW27_RS14345 WP_037921241.1 3344028..3345152(+) (disA) [Streptomyces sp. PCS3-D2 isolate P1]
GTGGCAGCCAAGGACGGGGCATCAGCTCCCGGGAAGTCCGGCGCGAGCTCCAGGCACGACGCCCTCATGCGCGCCTCGCT
GAGCGCGGTCGCACCTGGTCAGCCGCTGCGCGACGGCCTTGAGCGGATCGTGCGGGGCAACACCGGCGGCCTCATCGTCC
TGGGCATGGACAAGGCCGTCGAGGCGATGTGCACGGGCGGCTTCGTGCTGGACGTGGAGTTCACCGCGACCAGACTGCGC
GAGCTGTGCAAGCTCGACGGCGCGCTCATCCTCGACAAGGACCTCACCAAGATCCTGCGCGCCGGTGTGCAGCTCGTGCC
GGACGCCTCGATCCCCACGGAGGAGACGGGCACGCGCCACCGCACGGCCGACCGCGTGTCGAAGCAGTGCGGCTTCCCGG
TGGTGTCGGTGTCGCAGTCGATGCGGCTGATCGCACTGTACGTGGACGGGGAGCGGCGGGTCCTGGAGGAGTCCGGAGCG
ATCCTCTCCCGGGCGAATCAGGCGCTGGCCACGCTGGAGCGGTACAAGCTGCGCCTGGACGAGGTCGCGGGCACGCTGTC
GGCGCTGGAGATCGAGGACCTGGTCACGGTGCGTGACGTGACGGCGGTCGCGCAGCGGCTGGAAATGGTCCGCCGGATCG
CGACGGAAATCGCCGAGTACGTGGTCGAACTGGGCACGGACGGGCGTCTGCTGTCCCTCCAGTTGGACGAGCTGACGGTG
GGGATCGAGCAGGAGCGCGAGCTGGTCATCCGCGACTACGTGCCGGAGCCGACGGCGAAGCGTTCCCGCACGGTGGACGA
GGCGCTGGCGGAGCTGGACGCGCTGACCCACCCGGAGCTGCTGGAACTGCCCATCGTGGCGCGGGCACTGGGGTACACGG
GCTCGCCCGAGACGCTGGACTCGGCGGTGTCGCCCCGCGGTTACCGGCTGCTGGCGAAGGTGCCGAGGCTGCCGGGCGCG
ATCATCGAGCGGTTGGTGGAGCACTTCGGCGGTCTGCAGAAGCTGCTCGCGGCGAGCGTCGACGACCTGCAGGCGGTGGA
CGGGGTGGGCGAGGCCCGCGCACGGAGCGTCCGCGAGGGCCTGTCCCGCCTGGCCGAATCGTCCATCCTGGAGCGCTACG
TCTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

45.706

96.524

0.441