Detailed information NTG0595931

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: K4L72_RS17500
• Genome accession: NZ_CP081304
• Coordinates: 3537540..3538703 (-)
• Length: 387 a.a.
• NCBI ID: WP_079004916.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain CL-4
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3532540..3543703

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
K4L72_RS17470 (K4L72_17470)	-	3532805..3533224 (-)	420	WP_057080259.1	TIGR03826 family flagellar region protein	-
K4L72_RS17475 (K4L72_17475)	comFC	3533298..3533987 (-)	690	WP_196616643.1	phosphoribosyltransferase family protein	Machinery gene
K4L72_RS17480 (K4L72_17480)	-	3533993..3534277 (-)	285	WP_057080260.1	late competence development ComFB family protein	-
K4L72_RS17485 (K4L72_17485)	comFA	3534335..3535720 (-)	1386	WP_024085865.1	DEAD/DEAH box helicase	Machinery gene
K4L72_RS17490 (K4L72_17490)	-	3535828..3536676 (-)	849	WP_024085866.1	DegV family protein	-
K4L72_RS17495 (K4L72_17495)	degU	3536774..3537463 (-)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
K4L72_RS17500 (K4L72_17500)	degS	3537540..3538703 (-)	1164	WP_079004916.1	two-component sensor histidine kinase DegS	Regulator
K4L72_RS17505 (K4L72_17505)	-	3538926..3539573 (+)	648	WP_003151384.1	YigZ family protein	-
K4L72_RS17510 (K4L72_17510)	-	3539578..3540792 (+)	1215	WP_079004917.1	LCP family protein	-
K4L72_RS17515 (K4L72_17515)	-	3540882..3541958 (-)	1077	WP_003151382.1	glycosyltransferase family 4 protein	-
K4L72_RS17520 (K4L72_17520)	-	3542091..3543287 (-)	1197	WP_079004918.1	glycosyltransferase	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 44986.81 Da
• Isoelectric Point: 7.1377

>NTDB_id=595931 K4L72_RS17500 WP_079004916.1 3537540..3538703(-) (degS) [Bacillus velezensis strain CL-4]
MNKSKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVHTRHARNRLSEVSR
NFHKFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLRQVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEDGFQEIKNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTENKRLAPQFEVALFRLAQEAVTNALKHSESEEITVKVEV
TADFVVLIIKDNGKGFDIKDAKQKKNKSFGLLGMKERVDLLEGTITIDSKIGLGTFIMIKVPLSLGL

Nucleotide

• Length: 1164 bp

>NTDB_id=595931 K4L72_RS17500 WP_079004916.1 3537540..3538703(-) (degS) [Bacillus velezensis strain CL-4]
ATGAATAAATCGAAGATGGACTCCAAAGTTTTGGATTCTATACTTATGAAAATGCTGAAAACCGTGGACGGGAGCAAGGA
CGAGGTTTTTCAAATCGGAGAGCAGTCGCGCCAGCAATATGAGCAGCTGGTTGAAGAACTCAAACAGATCAAACAGCAGG
TGTACGAAGTCATTGAGCTGGGGGACAAACTTGAAGTTCATACGCGGCACGCACGAAACCGCTTGTCTGAAGTAAGCAGA
AATTTCCATAAGTTCAGCGAAGAAGAAATTCGCAACGCCTATGAAAAGGCGCACAAACTTCAAGTGGAACTGACGATGAT
CCAGCAGCGTGAAAAGCAGCTGCGGGAGCGCAGAGATGATTTAGAACGCCGGCTTTTGGGGCTTCAGGAAATCATTGAAC
GGTCAGAATCATTGGTCAGCCAAATAACCGTCGTTCTGAATTACCTGAATCAAGACCTTCGCCAAGTAGGGCTTCTTCTT
GCCGATGCGCAGGCTAAACAAGATTTCGGCTTAAGAATCATTGAAGCCCAAGAGGAAGAAAGAAAAAGAGTTTCCAGAGA
AATTCATGACGGTCCCGCGCAGATGCTGGCAAATGTCATGATGAGATCGGAATTAATTGAACGGATCTTCCGCGACCGCG
GCACGGAGGACGGATTTCAGGAAATCAAAAATCTTCGGCAGAATGTGCGGAATGCCCTTTACGAAGTCAGAAGGATTATA
TATGATTTAAGACCGATGGCATTGGACGATCTCGGGCTGATTCCTACACTGAGAAAATATCTTTATACAACTGAAGAATA
CAACGGAAAGGTGAAAATACATTTTCAGTGTATCGGAGACACGGAGAACAAAAGGCTTGCCCCGCAATTTGAAGTGGCGC
TTTTCCGTCTCGCTCAGGAAGCCGTCACAAATGCACTCAAACATTCAGAATCAGAGGAAATAACAGTAAAAGTGGAAGTA
ACCGCTGATTTTGTCGTTCTTATCATTAAGGACAACGGAAAAGGCTTTGATATTAAGGATGCTAAACAAAAGAAAAACAA
GTCATTTGGCTTGCTGGGAATGAAAGAAAGAGTAGATCTGCTTGAAGGAACGATAACGATAGACTCTAAAATAGGTCTTG
GGACATTTATCATGATTAAGGTTCCGTTATCTCTCGGCCTATAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Histidine kinase (HisKA_3) (180-248)

• Sensor protein DegS (DegS) (12-170)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	95.584	99.483	0.951