Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   JW646_RS17065 Genome accession   NZ_CP081135
Coordinates   3525320..3527089 (+) Length   589 a.a.
NCBI ID   WP_228415771.1    Uniprot ID   -
Organism   Terrisporobacter hibernicus strain MCA3     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 3520320..3532089
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JW646_RS17045 (JW646_17025) - 3520431..3521810 (+) 1380 WP_074916237.1 YjiH family protein -
  JW646_RS17050 (JW646_17030) - 3521980..3523383 (+) 1404 WP_228415770.1 protein kinase family protein -
  JW646_RS17055 (JW646_17035) - 3523427..3524485 (-) 1059 WP_074916239.1 HAMP domain-containing sensor histidine kinase -
  JW646_RS17060 (JW646_17040) - 3524475..3525152 (-) 678 WP_074916241.1 response regulator transcription factor -
  JW646_RS17065 (JW646_17045) rcrP 3525320..3527089 (+) 1770 WP_228415771.1 ABC transporter ATP-binding protein Regulator
  JW646_RS17070 (JW646_17050) rcrQ 3527082..3528845 (+) 1764 WP_228415772.1 ABC transporter ATP-binding protein Regulator
  JW646_RS17075 (JW646_17055) - 3529103..3530440 (+) 1338 WP_228415773.1 protein kinase domain-containing protein -
  JW646_RS17080 (JW646_17060) - 3530804..3531301 (+) 498 WP_074916249.1 GNAT family N-acetyltransferase -

Sequence

Protein


Download         Length: 589 a.a.        Molecular weight: 65971.02 Da        Isoelectric Point: 9.3181

>NTDB_id=595347 JW646_RS17065 WP_228415771.1 3525320..3527089(+) (rcrP) [Terrisporobacter hibernicus strain MCA3]
MLKILKYLTKKDWMFVLCNFLFVVVQVYLDLRLPDYMSEITRLVQTPNSEMSEILSAGGYMLLCAFGSLIAAFIVGYFAA
QIASNLSWKLRSSVYDKIEGFSMAEINKFSTASLITRSTNDITQIQNIVAMGLQLIIKAPITAVWAVCKILDKGWQWSGA
TGGAILVLVLIILVIMIFALPRFKKIQKLTDRLNLVTRENLTGIRVVRAYNAENYQKSKFENVNEEITKNNLVINRVMSI
MQPGMMFVMNGLTLAIYWIGAYLINDANIMDKMNLFSDMIVFSSYSMQVIMAFMMLTMIFIMMPRASVSAKRILEVLNTK
ESIVDGDGKFEKTSKTGEIEFKNVSFKYPDSEGSDYVLRDISFTAKMGETVAIIGSTGSGKTSLINLIPRFYDVTEGEVL
VNGVNVKKYKQKELNNLLGYVHQKAVLFSGDITSNVAYGNNGKGNYSELDVKRAVKIAQGTEFVEKMENTYNASISQGGS
NVSGGQKQRLSIARAICRKPEIYIFDDSFSALDYKTDRKLRSVLKHEISNATNLIVAQRIGTIIDADKIIVLDEGQIAGM
GTHHELMKKCRVYQEIAYSQLSKEELANA

Nucleotide


Download         Length: 1770 bp        

>NTDB_id=595347 JW646_RS17065 WP_228415771.1 3525320..3527089(+) (rcrP) [Terrisporobacter hibernicus strain MCA3]
ATGTTAAAGATATTAAAATATTTAACAAAAAAAGACTGGATGTTTGTACTTTGCAACTTTTTATTTGTAGTAGTGCAAGT
ATATCTTGATTTAAGACTACCAGATTATATGTCAGAAATAACAAGGTTAGTTCAGACACCAAATAGTGAAATGAGTGAAA
TATTAAGTGCTGGGGGTTATATGCTACTGTGTGCCTTTGGTAGTTTAATAGCAGCTTTTATAGTAGGTTATTTTGCAGCC
CAAATAGCTTCCAATTTATCATGGAAACTTCGTTCAAGTGTATACGATAAAATAGAAGGATTCTCAATGGCTGAAATTAA
TAAATTTTCTACAGCTAGTTTAATAACACGTTCAACTAATGATATTACTCAAATTCAAAATATTGTGGCTATGGGTCTTC
AATTAATAATAAAAGCTCCCATTACAGCAGTTTGGGCAGTTTGTAAAATTTTAGATAAAGGATGGCAATGGAGTGGTGCC
ACTGGTGGAGCCATATTAGTATTAGTATTAATTATCTTAGTAATAATGATATTTGCCTTACCTAGATTTAAAAAGATTCA
AAAATTAACTGACAGGCTTAACTTAGTAACAAGAGAAAATTTAACAGGAATACGTGTAGTTCGTGCATATAATGCAGAAA
ACTATCAAAAAAGTAAATTTGAAAATGTAAATGAAGAGATAACTAAAAACAACTTAGTAATAAATAGAGTTATGTCAATA
ATGCAACCAGGAATGATGTTTGTTATGAATGGGTTAACACTTGCCATATACTGGATAGGTGCTTATTTAATAAATGATGC
GAATATTATGGATAAAATGAATTTATTTAGTGATATGATAGTCTTCTCATCTTATTCAATGCAGGTAATAATGGCATTTA
TGATGTTAACAATGATATTTATAATGATGCCAAGGGCTTCAGTTTCAGCTAAACGTATACTTGAAGTATTAAACACAAAG
GAAAGTATAGTTGATGGAGATGGAAAATTTGAAAAGACTTCAAAAACTGGTGAAATAGAATTCAAAAATGTTAGCTTTAA
ATATCCAGATTCAGAAGGTTCAGACTATGTTCTTCGTGATATAAGCTTTACTGCTAAAATGGGTGAAACAGTTGCCATAA
TTGGATCCACAGGAAGTGGAAAAACTTCTTTAATTAATTTAATACCAAGATTTTATGATGTTACAGAAGGTGAAGTATTA
GTAAATGGAGTTAATGTAAAAAAATATAAACAAAAGGAGCTAAACAATCTTTTAGGATACGTTCATCAAAAGGCAGTGTT
ATTTTCTGGAGATATAACATCAAACGTGGCCTATGGTAATAATGGCAAGGGAAATTACTCTGAGTTAGACGTGAAAAGAG
CTGTGAAAATAGCCCAAGGAACTGAATTTGTTGAGAAAATGGAAAACACCTACAATGCAAGTATTTCTCAAGGAGGAAGT
AACGTATCAGGAGGACAAAAGCAAAGATTGTCCATAGCAAGAGCAATATGTAGAAAGCCAGAAATATACATATTTGACGA
TTCTTTCTCAGCACTTGATTATAAAACTGACAGAAAACTTAGATCTGTATTAAAACATGAAATATCTAATGCTACAAATT
TAATAGTTGCACAACGTATAGGTACTATAATTGATGCAGACAAAATAATAGTTTTAGATGAAGGACAAATAGCAGGTATG
GGAACACACCATGAACTTATGAAAAAATGTAGAGTCTATCAAGAAATAGCATATTCTCAGCTTTCAAAGGAGGAATTAGC
CAATGCTTAA

Domains

Predicted by InterproScan.

ABC transporter transmembrane region (ABC_membrane)

(18-293)

ABC transporter (ABC_tran)

(358-508)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

51.248

100

0.523