Detailed information NTG0595143

Bioinformatically predicted

Overview

• Name: comA
• Type: Machinery gene
• Locus tag: K2O50_RS19150
• Genome accession: NZ_CP081016
• Coordinates: 4245744..4247960 (-)
• Length: 738 a.a.
• NCBI ID: WP_220689929.1
• Uniprot ID: -
• Organism: Pseudomonas sp. 2hn
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 4240744..4252960

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
K2O50_RS19115 (K2O50_19115)	murB	4241030..4242049 (-)	1020	WP_050704694.1	UDP-N-acetylmuramate dehydrogenase	-
K2O50_RS19120 (K2O50_19120)	-	4242046..4242510 (-)	465	WP_050704693.1	low molecular weight protein-tyrosine-phosphatase	-
K2O50_RS19125 (K2O50_19125)	kdsB	4242510..4243274 (-)	765	WP_050704692.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
K2O50_RS19130 (K2O50_19130)	-	4243271..4243456 (-)	186	WP_011532874.1	Trm112 family protein	-
K2O50_RS19135 (K2O50_19135)	lpxK	4243491..4244495 (-)	1005	WP_050704691.1	tetraacyldisaccharide 4'-kinase	-
K2O50_RS19140 (K2O50_19140)	-	4244495..4244929 (-)	435	WP_028690977.1	biopolymer transporter ExbD	-
K2O50_RS19145 (K2O50_19145)	exbB	4244926..4245561 (-)	636	WP_028690976.1	MotA/TolQ/ExbB proton channel family protein	Machinery gene
K2O50_RS19150 (K2O50_19150)	comA	4245744..4247960 (-)	2217	WP_220689929.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
K2O50_RS19155 (K2O50_19155)	-	4248105..4248746 (+)	642	WP_052896362.1	DUF2062 domain-containing protein	-
K2O50_RS19160 (K2O50_19160)	-	4248630..4249409 (-)	780	WP_050704689.1	ABC transporter permease	-
K2O50_RS19165 (K2O50_19165)	-	4249406..4250338 (-)	933	WP_028690973.1	ABC transporter ATP-binding protein	-
K2O50_RS19170 (K2O50_19170)	-	4250471..4251094 (-)	624	WP_050704688.1	glutathione S-transferase	-
K2O50_RS19175 (K2O50_19175)	-	4251881..4252120 (+)	240	WP_082337677.1	hypothetical protein	-
K2O50_RS19180 (K2O50_19180)	-	4252117..4252356 (+)	240	WP_050704687.1	DUF3077 domain-containing protein	-

Sequence

Protein

• Length: 738 a.a.
• Molecular weight: 79752.52 Da
• Isoelectric Point: 11.4153

>NTDB_id=595143 K2O50_RS19150 WP_220689929.1 4245744..4247960(-) (comA) [Pseudomonas sp. 2hn]
MRTGMLALVLGLLSLRFLPALPPVGWLIPLLLLALASLRTRAWPLGWWVLGVCWACWSAQQALGDRLPAALDGRTLWLEG
RVVGLPTRTERGVRFELEQPQSRRARLPQRVQLSWFDGPPLRAGEHWRLAVNLRRPQGLLNPHGPDQEATLLARRVGATG
TVKAGTRQGEAASSWRDGLRQRLLATDAHGREAALAALVLGDGAGLAREDWQVLQATGTVHLLVISGQHIGLLAGLIYGL
VAGLARLGAWPRRLPWLPWACGLAMAAALGYGWLAGFGVPVQRACLMLAVVLLWRLRFRHLGAWVPLLMALSGVLLVEPL
ASLLPGFWLSFAAVTVLVLCFAARLGAWRPWQAWTRAQWVIAVGLLPVLLALGLPVSLSAPLANLLAVPWLSLGVLPLAM
LGTALLPVPGLGEGMLWLAGLSLDGLFAVLTRLAGLQPAWIPEPLPLWAWLLVCLGAVLVLLPRGVPLRAPGTVMLLALW
APREQVPPGQVEVWQLDVGQGLAVLLRTRNHALLYDAGPAQGGRDLGETVVLPTLRKLGVKALDVMLISHGHADHAGGAA
AVRRGVPVARVLAGEVAGLEAASLCRSGERWQWDGVDFELWHWPQGASSNERSCALRVQAKGERLLLAGDMEAGAERAWL
AATDDPRVDWLQAPHHGSRTSSSEPFVQATAPRGVLVSRGRHNGFGHPHGQVIERYRRHGVAVHDTAVEGALRLVLGSRG
GVEGVRRKRRFWREVDEG

Nucleotide

• Length: 2217 bp

>NTDB_id=595143 K2O50_RS19150 WP_220689929.1 4245744..4247960(-) (comA) [Pseudomonas sp. 2hn]
ATGCGCACAGGGATGCTGGCGCTGGTCCTCGGGCTGTTGAGCCTGCGCTTTTTACCTGCCTTGCCACCGGTCGGATGGCT
GATTCCATTGCTGTTGCTGGCCCTGGCCAGCCTGCGTACCCGGGCCTGGCCGCTGGGTTGGTGGGTGCTGGGTGTGTGCT
GGGCCTGCTGGTCGGCGCAGCAGGCCCTGGGCGACCGCCTGCCGGCCGCGCTGGACGGTCGCACGCTGTGGCTGGAGGGG
CGGGTGGTCGGCCTGCCGACCCGTACCGAGCGCGGCGTGCGTTTCGAGCTTGAGCAGCCGCAGTCGCGCCGGGCCCGGTT
GCCCCAACGCGTGCAACTGAGCTGGTTCGACGGGCCGCCGCTGCGGGCGGGGGAGCACTGGCGGCTGGCGGTCAACCTGC
GTCGGCCGCAGGGCCTGCTCAACCCCCATGGCCCCGATCAGGAGGCCACGCTGTTGGCGCGGCGGGTCGGTGCCACCGGC
ACGGTCAAGGCCGGTACGCGCCAGGGCGAGGCGGCCAGCAGTTGGCGCGACGGCCTGCGCCAGCGCTTGCTGGCCACCGA
TGCCCATGGCCGGGAGGCGGCGTTGGCCGCCCTGGTGCTCGGGGATGGCGCAGGCTTGGCGCGGGAGGACTGGCAGGTGC
TGCAGGCCACCGGCACGGTGCACCTGCTGGTGATTTCCGGGCAGCACATCGGCTTGCTGGCTGGATTGATCTACGGGCTG
GTGGCGGGGCTGGCGCGCCTGGGGGCCTGGCCCCGGCGGTTGCCGTGGCTGCCCTGGGCCTGCGGCCTGGCGATGGCGGC
GGCGCTGGGTTACGGCTGGCTGGCGGGGTTCGGCGTGCCGGTGCAGCGGGCGTGCCTGATGCTGGCGGTGGTGCTGCTCT
GGCGCTTGCGCTTTCGCCACTTGGGCGCCTGGGTGCCGTTGCTGATGGCGCTGTCGGGCGTGCTGCTGGTCGAGCCGCTG
GCCAGCCTGTTGCCGGGGTTCTGGCTGTCGTTCGCTGCCGTGACGGTGCTGGTGTTGTGCTTCGCCGCCCGGCTGGGCGC
CTGGCGGCCCTGGCAGGCCTGGACCCGCGCCCAGTGGGTGATTGCCGTGGGGTTGTTGCCGGTGCTGCTGGCCTTGGGGC
TGCCCGTCAGCCTCAGTGCGCCGCTGGCCAATCTGCTGGCCGTGCCGTGGCTCAGCCTGGGCGTGCTGCCGCTGGCGATG
CTGGGCACGGCCCTGTTGCCGGTGCCTGGGCTGGGGGAGGGGATGTTGTGGCTGGCGGGCCTGTCGTTGGACGGCTTGTT
TGCCGTGCTGACGCGATTGGCGGGCCTGCAGCCGGCCTGGATACCCGAGCCGCTGCCGTTGTGGGCCTGGCTGCTGGTGT
GCCTGGGCGCCGTGCTGGTGTTGCTGCCCCGGGGCGTGCCGTTGCGGGCGCCGGGCACGGTCATGCTGCTGGCGCTGTGG
GCACCACGCGAGCAGGTGCCTCCGGGGCAAGTGGAGGTCTGGCAGCTGGATGTGGGGCAGGGCCTGGCGGTGCTGCTGCG
TACTCGCAATCACGCGCTGCTGTATGACGCAGGCCCGGCCCAGGGTGGCCGTGACCTGGGCGAGACGGTGGTGCTGCCGA
CCTTGCGCAAGCTGGGGGTGAAGGCGCTGGATGTGATGCTGATCAGCCATGGCCATGCCGACCATGCTGGTGGGGCGGCG
GCGGTGCGGCGAGGGGTGCCGGTGGCACGGGTGCTGGCCGGCGAGGTTGCCGGGCTGGAAGCGGCGTCGCTTTGCCGCAG
TGGCGAGCGCTGGCAGTGGGATGGCGTCGATTTCGAGCTTTGGCATTGGCCGCAGGGGGCTTCCAGCAACGAGCGTTCCT
GTGCGTTGCGGGTGCAGGCCAAGGGCGAGCGCCTGCTGCTGGCCGGGGACATGGAGGCCGGCGCGGAGCGGGCGTGGCTG
GCCGCGACCGATGATCCTCGGGTGGACTGGTTGCAGGCGCCGCACCATGGCAGCCGCACGTCGTCCAGCGAGCCGTTCGT
CCAGGCCACGGCGCCGCGCGGGGTGTTGGTTTCCCGAGGGCGGCACAATGGTTTCGGGCATCCCCATGGGCAGGTGATCG
AGCGCTATCGGCGGCATGGGGTGGCAGTGCATGACACGGCGGTGGAGGGGGCGTTGCGGTTGGTGCTGGGGAGTCGGGGT
GGGGTGGAGGGTGTGCGCAGGAAGCGGCGGTTCTGGCGTGAGGTTGACGAGGGCTGA

Domains

Predicted by InterProScan.

• Metallo-beta-lactamase superfamily (Lactamase_B) (497-664)

• Domain of unknown function (DUF4131) (DUF4131) (22-166)

• Competence protein (Competence) (198-462)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Pseudomonas stutzeri DSM 10701	59.527	97.425	0.58
comA	Ralstonia pseudosolanacearum GMI1000	35.28	100	0.409