Detailed information    

insolico Bioinformatically predicted

Overview

Name   letA   Type   Regulator
Locus tag   M2M89_RS18835 Genome accession   NZ_CP097130
Coordinates   3671282..3671656 (-) Length   124 a.a.
NCBI ID   WP_003227621.1    Uniprot ID   A0A9W5LLN9
Organism   Bacillus subtilis strain S16     
Function   regulate competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 3666282..3676656
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  M2M89_RS18810 - 3666446..3666607 (-) 162 WP_003227632.1 hypothetical protein -
  M2M89_RS18815 glpX 3666822..3667787 (-) 966 WP_003242962.1 class II fructose-bisphosphatase -
  M2M89_RS18820 murAB 3667818..3669107 (-) 1290 WP_003227628.1 UDP-N-acetylglucosamine 1-carboxyvinyltransferase -
  M2M89_RS18825 fsa 3669486..3670124 (-) 639 WP_003227626.1 fructose-6-phosphate aldolase -
  M2M89_RS18830 fbaA 3670244..3671101 (-) 858 WP_003243339.1 class II fructose-bisphosphate aldolase -
  M2M89_RS18835 letA 3671282..3671656 (-) 375 WP_003227621.1 sporulation initiation phosphotransferase Spo0F Regulator
  M2M89_RS18840 ywjG 3671822..3672343 (+) 522 WP_003242809.1 DUF2529 domain-containing protein -
  M2M89_RS18845 pyrG 3672425..3674032 (-) 1608 WP_003227612.1 glutamine hydrolyzing CTP synthase -
  M2M89_RS18850 rpoE 3674274..3674798 (-) 525 WP_128441915.1 DNA-directed RNA polymerase subunit delta -
  M2M89_RS18855 acdA 3674981..3676120 (-) 1140 WP_015251002.1 acyl-CoA dehydrogenase AcdA -

Sequence

Protein


Download         Length: 124 a.a.        Molecular weight: 14227.68 Da        Isoelectric Point: 4.6400

>NTDB_id=593731 M2M89_RS18835 WP_003227621.1 3671282..3671656(-) (letA) [Bacillus subtilis strain S16]
MMNEKILIVDDQYGIRILLNEVFNKEGYQTFQAANGLQALDIVTKERPDLVLLDMKIPGMDGIEILKRMKVIDENIRVII
MTAYGELDMIQESKELGALTHFAKPFDIDEIRDAVKKYLPLKSN

Nucleotide


Download         Length: 375 bp        

>NTDB_id=593731 M2M89_RS18835 WP_003227621.1 3671282..3671656(-) (letA) [Bacillus subtilis strain S16]
ATGATGAATGAAAAAATTTTAATCGTTGATGATCAATACGGCATTCGTATTTTGCTAAATGAAGTGTTCAATAAAGAAGG
CTACCAGACGTTTCAGGCTGCGAACGGCCTGCAGGCGCTTGACATTGTGACAAAAGAACGGCCCGACCTTGTGCTTTTGG
ACATGAAAATTCCCGGCATGGACGGAATCGAAATCTTAAAACGGATGAAGGTCATTGACGAAAACATCCGGGTCATTATC
ATGACGGCATACGGAGAGCTCGACATGATCCAGGAATCGAAGGAATTGGGCGCTCTGACGCACTTTGCCAAGCCGTTTGA
CATCGACGAAATCAGAGACGCCGTCAAAAAATATCTGCCCCTGAAGTCTAACTGA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(6-116)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A9W5LLN9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  letA Legionella pneumophila str. Paris

38.462

94.355

0.363
  letA Legionella pneumophila strain ERS1305867

38.462

94.355

0.363