Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   K0V03_RS12920 Genome accession   NZ_CP080508
Coordinates   2444364..2445314 (+) Length   316 a.a.
NCBI ID   WP_014475804.1    Uniprot ID   A0A0C3FBZ6
Organism   Bacillus subtilis strain HD15     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2439364..2450314
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  K0V03_RS12895 (K0V03_12895) rapC 2440824..2441972 (+) 1149 WP_014475800.1 response regulator aspartate phosphatase RapC Regulator
  K0V03_RS12900 (K0V03_12900) phrC 2441956..2442078 (+) 123 WP_003224994.1 phosphatase RapC inhibitor PhrC Regulator
  K0V03_RS12905 (K0V03_12905) yczM 2442178..2442267 (-) 90 WP_015482794.1 YjcZ family sporulation protein -
  K0V03_RS12910 (K0V03_12910) yczN 2442349..2442462 (-) 114 WP_014478831.1 YjcZ family sporulation protein -
  K0V03_RS12915 (K0V03_12915) thrD 2442615..2443979 (-) 1365 WP_015715246.1 aspartate kinase -
  K0V03_RS12920 (K0V03_12920) ceuB 2444364..2445314 (+) 951 WP_014475804.1 petrobactin ABC transporter permease YclN Machinery gene
  K0V03_RS12925 (K0V03_12925) yclO 2445307..2446254 (+) 948 WP_014475805.1 petrobactin ABC transporter permease YclO -
  K0V03_RS12930 (K0V03_12930) yclP 2446248..2447006 (+) 759 WP_014475806.1 petrobactin ABC transporter ATP-binding protein YclP -
  K0V03_RS12935 (K0V03_12935) yclQ 2447028..2447981 (+) 954 WP_046160056.1 petrobactin ABC transporter substrate-binding protein YclQ -
  K0V03_RS12940 (K0V03_12940) cdaE 2448028..2449446 (-) 1419 WP_014478836.1 MDR family MFS transporter -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34871.27 Da        Isoelectric Point: 9.9364

>NTDB_id=593331 K0V03_RS12920 WP_014475804.1 2444364..2445314(+) (ceuB) [Bacillus subtilis strain HD15]
MKLRYLFILLIILAVTSVFIGVEDLSPLDLFDLSKQEASTLFASRLPRLISIVIAGLSMSICGLIMQQISRNKFVSPTTA
GTMDWARLGILISLLLFTSASPLIKMLVAFVFALAGNFLFMKILERIKFNDTIFIPLVGLMLGNIVSSIATFIAYKYDLI
QNVSSWLQGDFSLVVKGRYELLYLSIPLVIIAYVYADKFTLAGMGESFSVNLGLKYKRVVNIGLIIVSLITSLVILTVGM
LPFLGLIIPNIVSIYRGDNLKSSLPHTALLGAVFVLFCDILGRIIIFPYEISIGLMVGIIGSGIFLFMLLRRKAYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=593331 K0V03_RS12920 WP_014475804.1 2444364..2445314(+) (ceuB) [Bacillus subtilis strain HD15]
ATGAAGCTACGTTACTTATTTATTCTACTTATCATATTAGCAGTCACATCTGTATTTATCGGTGTAGAAGATCTGTCGCC
GCTTGATCTCTTCGATTTAAGCAAACAAGAGGCGTCAACGCTGTTTGCAAGCCGTTTGCCGCGATTGATCAGCATTGTCA
TCGCGGGATTAAGCATGAGCATCTGCGGTTTGATTATGCAGCAGATCAGCAGAAACAAATTCGTGTCACCGACGACGGCG
GGCACGATGGATTGGGCGAGGCTCGGCATTTTAATTTCCTTGCTGCTGTTTACATCCGCCAGTCCTTTAATCAAAATGCT
GGTCGCGTTTGTCTTTGCCCTTGCAGGAAATTTTCTGTTTATGAAAATCCTTGAAAGAATCAAGTTTAACGATACCATCT
TTATTCCGCTTGTCGGTTTAATGCTCGGGAATATCGTCAGTTCAATCGCGACATTTATCGCATATAAATATGACTTGATC
CAGAATGTGTCATCATGGCTGCAGGGAGACTTCTCTTTAGTCGTGAAAGGAAGATACGAGCTTCTTTATCTGAGTATTCC
GCTCGTGATCATTGCCTATGTGTATGCGGATAAATTCACATTGGCCGGTATGGGTGAAAGCTTTTCTGTCAACCTCGGCC
TGAAGTACAAACGGGTTGTGAACATCGGGCTCATTATCGTGTCCCTGATCACGTCCCTTGTTATTTTGACTGTCGGTATG
CTGCCGTTTCTCGGTTTAATCATCCCGAATATTGTATCGATTTACAGAGGAGACAATCTGAAGAGCAGCCTGCCGCATAC
TGCGCTGTTGGGAGCGGTTTTTGTGCTGTTTTGCGATATACTGGGCAGAATCATTATCTTCCCTTATGAAATCTCGATTG
GCCTGATGGTCGGAATCATCGGCAGCGGCATTTTCCTGTTTATGCTGTTAAGGAGAAAAGCCTATGCGTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0C3FBZ6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52.532

100

0.525