Detailed information    

insolico Bioinformatically predicted

Overview

Name   nin/comJ   Type   Regulator
Locus tag   K0V03_RS12720 Genome accession   NZ_CP080508
Coordinates   2383730..2384128 (-) Length   132 a.a.
NCBI ID   WP_015715226.1    Uniprot ID   A0AA96URL7
Organism   Bacillus subtilis strain HD15     
Function   represses the expression of nucA (predicted from homology)   
Competence regulation

Genomic Context

Location: 2378730..2389128
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  K0V03_RS12685 (K0V03_12685) - 2379477..2379674 (+) 198 WP_122060560.1 hypothetical protein -
  K0V03_RS12690 (K0V03_12690) yckC 2379694..2380148 (+) 455 Protein_2470 RDD family protein -
  K0V03_RS12695 (K0V03_12695) yckD 2380230..2380562 (+) 333 WP_046160038.1 YckD family protein -
  K0V03_RS12700 (K0V03_12700) - 2380689..2381111 (+) 423 WP_170939093.1 MarR family winged helix-turn-helix transcriptional regulator -
  K0V03_RS12705 (K0V03_12705) - 2381099..2381440 (+) 342 WP_032724911.1 DUF3147 family protein -
  K0V03_RS12710 (K0V03_12710) - 2381459..2382187 (+) 729 WP_021481826.1 AAA family ATPase -
  K0V03_RS12715 (K0V03_12715) bglC 2382260..2383693 (+) 1434 WP_097080589.1 6-phospho-beta-glucosidase -
  K0V03_RS12720 (K0V03_12720) nin/comJ 2383730..2384128 (-) 399 WP_015715226.1 DNA-entry nuclease inhibitor Regulator
  K0V03_RS12725 (K0V03_12725) nucA/comI 2384155..2384604 (-) 450 WP_003234608.1 DNA-entry nuclease Machinery gene
  K0V03_RS12730 (K0V03_12730) tlpC 2384772..2386493 (-) 1722 WP_085186742.1 methyl-accepting chemotaxis protein TlpC -
  K0V03_RS12735 (K0V03_12735) hxlB 2386604..2387161 (-) 558 WP_003234605.1 6-phospho-3-hexuloisomerase -
  K0V03_RS12740 (K0V03_12740) hxlA 2387167..2387799 (-) 633 WP_003234604.1 3-hexulose-6-phosphate synthase -
  K0V03_RS12745 (K0V03_12745) hxlR 2388032..2388394 (+) 363 WP_003246265.1 transcriptional activator HxlR -

Sequence

Protein


Download         Length: 132 a.a.        Molecular weight: 14935.90 Da        Isoelectric Point: 4.8991

>NTDB_id=593327 K0V03_RS12720 WP_015715226.1 2383730..2384128(-) (nin/comJ) [Bacillus subtilis strain HD15]
MIKSWKPQELSISYHQFTVFQKDSTPPVMDWTDEAIEKGYAAADGAISFEAQRNTKAFILLRLNSSETVSSYEKKVTVPF
HVTENGIHIESIMSKRLSFDLPKGDYQLTCWTVPAEMSDLHADTYIIDAVSV

Nucleotide


Download         Length: 399 bp        

>NTDB_id=593327 K0V03_RS12720 WP_015715226.1 2383730..2384128(-) (nin/comJ) [Bacillus subtilis strain HD15]
TTGATCAAATCATGGAAGCCGCAAGAACTTTCGATTTCATATCATCAATTTACTGTATTTCAAAAGGATTCTACACCTCC
TGTAATGGATTGGACTGACGAAGCGATTGAAAAAGGATATGCTGCGGCAGACGGAGCCATTTCCTTTGAGGCACAGCGAA
ATACAAAGGCCTTTATTCTTTTGCGCCTGAACAGTTCAGAAACAGTAAGCTCCTACGAAAAAAAAGTGACTGTTCCTTTT
CATGTCACAGAAAACGGAATTCATATTGAAAGCATCATGTCTAAAAGACTGTCCTTTGATCTGCCTAAAGGAGACTATCA
ATTGACATGCTGGACTGTGCCGGCTGAAATGTCAGATTTGCACGCCGACACTTATATTATTGATGCTGTTTCTGTGTAA

Domains

Predicted by InterproScan.

Competence protein J (ComJ) (ComJ)

(9-129)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  nin/comJ Bacillus subtilis subsp. subtilis str. 168

98.485

100

0.985