Detailed information NTG0593316

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: K0V03_RS08645
• Genome accession: NZ_CP080508
• Coordinates: 1612275..1613420 (+)
• Length: 381 a.a.
• NCBI ID: WP_021480843.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain HD15
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 1607275..1618420

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
K0V03_RS08625 (K0V03_08625)	albE	1607410..1608570 (+)	1161	WP_085185987.1	antilisterial bacteriocin subtilosin biosynthesis protein AlbE	-
K0V03_RS08630 (K0V03_08630)	albF	1608575..1609855 (+)	1281	WP_085185520.1	pitrilysin family protein	-
K0V03_RS08635 (K0V03_08635)	albG	1609852..1610553 (+)	702	WP_085185518.1	antilisterial bacteriocin subtilosin biosynthesis protein AlbG	-
K0V03_RS08640 (K0V03_08640)	-	1610690..1612045 (-)	1356	WP_085185516.1	YncE family protein	-
K0V03_RS08645 (K0V03_08645)	rapF	1612275..1613420 (+)	1146	WP_021480843.1	response regulator aspartate phosphatase RapF	Regulator
K0V03_RS08650 (K0V03_08650)	phrF	1613404..1613523 (+)	120	WP_085185514.1	phosphatase RapF inhibitor PhrF	Regulator
K0V03_RS08655 (K0V03_08655)	ywhH	1613621..1614093 (+)	473	Protein_1710	YbaK/EbsC family protein	-
K0V03_RS08660 (K0V03_08660)	speB	1614124..1614996 (-)	873	WP_003227545.1	agmatinase	-
K0V03_RS08665 (K0V03_08665)	speE	1615057..1615887 (-)	831	WP_003227543.1	spermidine synthase	-
K0V03_RS08670 (K0V03_08670)	pbpG	1616089..1618164 (+)	2076	WP_085185512.1	transglycosylase domain-containing protein	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 45603.10 Da
• Isoelectric Point: 5.1493

>NTDB_id=593316 K0V03_RS08645 WP_021480843.1 1612275..1613420(+) (rapF) [Bacillus subtilis strain HD15]
MTGVISSSSIGEKINEWYMYIRRFSIPDAEYLRREIKQELDQMEEDQDLHLYYSLMEFRHNLMLEYLEPLEKMRIEEQPR
LSDLLLEIDKKQARLTGLLEYYFNFFRGMYELDQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYYMKQTYFS
MDYARQAYEIYKENEAYNIRLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYED
AIPYFKRAIAVFEESNILPSLPQAYFLITQIHYKLGKMDKAHEYHSKGMAYSQKAGDVIYLSEFEFLKSLYLSGPDEEAI
QGFFNFLESKMLYADLEDFAIDVAKYYHERKNFQKASAYFLKVEQVRQLIQGGVSLYEIEV

Nucleotide

• Length: 1146 bp

>NTDB_id=593316 K0V03_RS08645 WP_021480843.1 1612275..1613420(+) (rapF) [Bacillus subtilis strain HD15]
GTGACAGGTGTCATATCTTCTTCTTCCATCGGAGAAAAGATTAACGAATGGTATATGTACATACGCCGATTCAGCATACC
CGATGCAGAATATTTGCGACGAGAAATCAAGCAAGAGCTGGATCAAATGGAAGAAGATCAAGACCTTCATTTGTACTATT
CACTGATGGAGTTTCGGCACAACCTAATGCTTGAGTACCTTGAACCGTTAGAAAAAATGAGGATTGAGGAACAGCCGAGA
CTGTCTGATCTGCTGCTTGAGATTGATAAAAAACAGGCTCGTTTAACTGGTCTGCTTGAGTACTATTTTAATTTCTTCAG
AGGCATGTATGAGCTGGACCAGCGGGAATATCTGTCGGCTATTAAATTTTTCAAAAAGGCCGAAAGCAAGCTGATATTCG
TTAAGGATCGGATAGAGAAAGCTGAGTTTTTCTTTAAGATGTCTGAATCTTATTACTATATGAAACAAACGTATTTTTCA
ATGGACTATGCACGGCAAGCATATGAAATATACAAAGAAAATGAAGCTTATAATATAAGATTGCTGCAGTGTCATTCTTT
ATTTGCCACCAATTTTTTAGATTTAAAACAGTATGAGGATGCCATCTCACATTTTCAAAAAGCTTATTCTATGGCAGAAG
CTGAAAAGCAGCCCCAATTAATGGGAAGAACTTTGTACAATATCGGGCTTTGTAAAAACAGCCAAAGCCAATATGAGGAT
GCCATACCTTATTTCAAAAGAGCAATAGCTGTTTTTGAAGAATCAAATATTCTTCCTTCCTTACCTCAAGCGTATTTTTT
AATTACACAGATCCATTATAAATTAGGAAAAATGGATAAAGCTCATGAATATCATAGTAAGGGAATGGCTTATTCACAAA
AGGCCGGAGATGTAATATATTTATCAGAGTTTGAATTTTTGAAATCTTTATACTTATCAGGCCCGGATGAAGAAGCAATT
CAAGGATTTTTTAATTTTCTCGAAAGTAAAATGTTGTATGCTGATCTTGAAGATTTCGCTATTGATGTGGCAAAATATTA
TCATGAACGTAAAAATTTTCAAAAAGCTTCTGCTTATTTTTTGAAGGTGGAACAAGTAAGGCAACTTATTCAAGGAGGAG
TGAGTTTGTATGAAATTGAAGTCTAA

Domains

Predicted by InterproScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

• Anaphase-promoting complex, cyclosome, subunit 3 (ANAPC3) (132-208)

• Tetratricopeptide repeat (TPR_12) (223-290)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	99.213	100	0.992
rapC	Bacillus subtilis subsp. subtilis str. 168	57.368	99.738	0.572