Detailed information    

insolico Bioinformatically predicted

Overview


Name   vraS   Type   Regulator
Locus tag   CA347_RS10170 Genome accession   NC_021554
Coordinates   2023562..2024605 (-) Length   347 a.a.
NCBI ID   WP_016528753.1    Uniprot ID   -
Organism   Staphylococcus aureus CA-347     
Function   repress expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 2018562..2029605
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CA347_RS10140 (CA347_1966) - 2018983..2020230 (-) 1248 WP_001622131.1 aminopeptidase -
  CA347_RS10145 (CA347_1967) - 2020242..2020442 (-) 201 WP_000180459.1 DUF1128 family protein -
  CA347_RS10150 (CA347_1968) - 2020589..2021053 (+) 465 WP_000228668.1 low molecular weight protein-tyrosine-phosphatase -
  CA347_RS10155 (CA347_1969) - 2021060..2021335 (+) 276 WP_000428172.1 YtxH domain-containing protein -
  CA347_RS10160 (CA347_1970) - 2021613..2022830 (+) 1218 WP_000037083.1 YihY/virulence factor BrkB family protein -
  CA347_RS10165 (CA347_1971) vraR 2022943..2023572 (-) 630 WP_000153535.1 two-component system response regulator VraR Regulator
  CA347_RS10170 (CA347_1972) vraS 2023562..2024605 (-) 1044 WP_016528753.1 sensor histidine kinase Regulator
  CA347_RS10175 (CA347_1973) liaF 2024602..2025303 (-) 702 WP_000149064.1 cell wall-active antibiotics response protein LiaF -
  CA347_RS10180 (CA347_1974) - 2025318..2025704 (-) 387 WP_001110184.1 hypothetical protein -
  CA347_RS10185 (CA347_1975) map 2025921..2026679 (-) 759 WP_000636137.1 type I methionyl aminopeptidase -
  CA347_RS10195 (CA347_1976) - 2027322..2028308 (+) 987 WP_000999713.1 FUSC family protein -
  CA347_RS10200 (CA347_1977) - 2028486..2028899 (-) 414 WP_001622129.1 hypothetical protein -
  CA347_RS10205 - 2028928..2029037 (-) 110 Protein_1953 hypothetical protein -

Sequence


Protein


Download         Length: 347 a.a.        Molecular weight: 40086.60 Da        Isoelectric Point: 6.0577

>NTDB_id=59327 CA347_RS10170 WP_016528753.1 2023562..2024605(-) (vraS) [Staphylococcus aureus CA-347]
MNHYIRTIVSMLILVYSMLAAFLFIDKVFVNIIYFQGMFYTQIFGIPVFLFLNLIIILLCIIVGSVLAYKINQQNDWIKT
QIERSMEGETVGINDQNIEIYSETLDLYHTLVPLNQELHKLRLKTQNLTNENYNINDVKVKKIIEDERQRLARELHDSVS
QQLFAASMMLSAIKETKLEPPLDQQIPILEKMVQDSQLEMRALLLHLRPLGLKDKSLGEGIKDLVIDLQKKVPMKVVHEI
QDFKVPKGIEDHLFRITQEAISNTLRHSNGTKVTVELFNKDDYLLLRIQDNGKGFNVDEKLEQSYGLKNMRERALEIGAT
FHIVSLPDSGTRIEVKAPLNKEDSYDD

Nucleotide


Download         Length: 1044 bp        

>NTDB_id=59327 CA347_RS10170 WP_016528753.1 2023562..2024605(-) (vraS) [Staphylococcus aureus CA-347]
ATGAACCACTACATTAGAACAATTGTTTCAATGCTCATCTTAGTATATAGCATGCTAGCTGCATTTCTGTTCATCGATAA
AGTTTTTGTAAATATCATCTATTTTCAAGGTATGTTTTATACACAAATATTCGGAATACCAGTCTTTTTATTTTTAAATC
TCATCATCATATTATTGTGTATTATTGTTGGTTCGGTACTCGCTTACAAAATCAATCAGCAAAATGATTGGATTAAGACG
CAAATTGAGCGTTCAATGGAAGGCGAAACAGTTGGCATTAATGATCAAAATATAGAAATATATAGTGAAACGTTAGATTT
ATACCATACACTCGTACCTTTAAATCAAGAATTGCATAAGTTGCGACTTAAAACTCAAAACTTAACCAATGAAAATTATA
ATATTAATGATGTGAAAGTTAAAAAGATTATTGAAGATGAACGTCAAAGACTAGCACGAGAACTTCACGATTCTGTTAGT
CAGCAACTTTTTGCGGCAAGTATGATGCTATCTGCTATCAAAGAAACGAAGTTAGAACCACCATTAGACCAACAAATTCC
GATTTTAGAGAAAATGGTTCAAGATTCGCAGTTAGAAATGCGTGCTTTGCTGTTACATTTAAGACCGCTTGGTTTAAAAG
ACAAATCTTTAGGTGAGGGTATTAAAGATTTAGTTATTGATTTACAAAAAAAAGTGCCAATGAAAGTTGTGCATGAAATA
CAAGATTTTAAAGTACCTAAAGGTATTGAAGATCATTTGTTCAGAATTACACAGGAAGCAATTTCGAATACATTGCGTCA
TTCAAACGGTACAAAAGTGACAGTCGAATTGTTTAATAAAGACGATTATTTATTGTTGAGAATTCAAGACAATGGTAAAG
GTTTTAATGTTGATGAAAAATTAGAACAAAGTTATGGACTTAAAAATATGCGTGAAAGAGCTTTGGAAATTGGTGCAACG
TTCCATATTGTATCATTGCCAGATTCAGGTACACGTATCGAGGTGAAAGCACCTTTAAATAAGGAGGATTCGTATGACGA
TTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vraS Staphylococcus aureus N315

99.712

100

0.997


Multiple sequence alignment