Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   Sta0113_RS02490 Genome accession   NZ_CP080457
Coordinates   510910..511575 (-) Length   221 a.a.
NCBI ID   WP_002454771.1    Uniprot ID   -
Organism   Staphylococcus hominis subsp. hominis strain WiKim0113     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 505910..516575
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  Sta0113_RS02470 (Sta0113_02465) - 506314..507078 (-) 765 WP_049382135.1 DUF4064 domain-containing protein -
  Sta0113_RS02475 (Sta0113_02470) - 507170..509125 (-) 1956 WP_049379410.1 FtsX-like permease family protein -
  Sta0113_RS02480 (Sta0113_02475) - 509127..509876 (-) 750 WP_049379409.1 ABC transporter ATP-binding protein -
  Sta0113_RS02485 (Sta0113_02480) braS 510008..510904 (-) 897 WP_049379408.1 sensor histidine kinase Regulator
  Sta0113_RS02490 (Sta0113_02485) braR 510910..511575 (-) 666 WP_002454771.1 response regulator transcription factor Regulator
  Sta0113_RS02495 (Sta0113_02490) - 511588..511755 (-) 168 WP_002488268.1 hypothetical protein -
  Sta0113_RS02500 (Sta0113_02495) - 511926..512099 (-) 174 WP_176743953.1 hypothetical protein -
  Sta0113_RS02505 (Sta0113_02500) - 512481..513953 (+) 1473 WP_145436963.1 alkaline phosphatase -
  Sta0113_RS02510 (Sta0113_02505) - 514067..515011 (-) 945 WP_145436964.1 LCP family protein -
  Sta0113_RS02515 (Sta0113_02510) - 515027..516157 (-) 1131 WP_283102565.1 DegT/DnrJ/EryC1/StrS family aminotransferase -

Sequence

Protein


Download         Length: 221 a.a.        Molecular weight: 25456.21 Da        Isoelectric Point: 4.5773

>NTDB_id=592964 Sta0113_RS02490 WP_002454771.1 510910..511575(-) (braR) [Staphylococcus hominis subsp. hominis strain WiKim0113]
MKVLIVEDDVVIAESLGNELSHWNYEVSIAKQFDNILEEFKTAEPELVLLDINLPTFNGYHWCQEIRKVSNVPIIFISSR
TDNMDQIMAIQMGGDDFIEKPFNLSLTIAKIQALLRRTYDLTVSNNEMTVKGCKLVVDEATLYYNNDSVQLSFTELQILN
KLFQNEGKYVNRTAIIEKCWESENFIDDNTLAVNMTRLRKKLQSIGIVDFIETKKNVGYKV

Nucleotide


Download         Length: 666 bp        

>NTDB_id=592964 Sta0113_RS02490 WP_002454771.1 510910..511575(-) (braR) [Staphylococcus hominis subsp. hominis strain WiKim0113]
ATGAAAGTATTGATTGTCGAAGATGATGTCGTCATTGCAGAAAGTCTAGGGAATGAACTCTCACATTGGAACTATGAAGT
GAGTATTGCTAAGCAGTTTGATAATATTCTTGAAGAATTTAAAACTGCAGAACCTGAACTTGTGTTATTAGATATTAATT
TACCTACATTTAATGGTTATCATTGGTGCCAAGAGATACGTAAAGTATCTAATGTCCCAATTATTTTCATTAGTTCGCGT
ACTGATAATATGGATCAAATTATGGCAATTCAAATGGGTGGAGATGACTTTATTGAAAAGCCATTTAATTTGTCACTTAC
TATAGCGAAAATTCAAGCATTGCTTCGTAGAACATATGATTTAACGGTTTCAAATAATGAGATGACTGTTAAAGGGTGTA
AGCTCGTTGTTGATGAAGCCACACTATACTACAACAATGACTCTGTACAACTTTCGTTTACTGAACTACAAATTTTGAAT
AAATTATTTCAAAATGAAGGAAAATATGTCAATCGTACAGCAATTATTGAAAAATGTTGGGAATCGGAGAATTTTATTGA
TGATAATACGTTAGCAGTAAATATGACACGCCTACGTAAAAAACTGCAATCTATCGGTATTGTTGATTTCATTGAGACAA
AGAAAAATGTAGGATATAAGGTGTAA

Domains

Predicted by InterproScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(147-220)

Response regulator receiver domain (Response_reg)

(3-111)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

77.376

100

0.774