Detailed information    

insolico Bioinformatically predicted

Overview

Name   comEA   Type   Machinery gene
Locus tag   KZZ50_RS07965 Genome accession   NZ_CP080251
Coordinates   1644175..1644861 (-) Length   228 a.a.
NCBI ID   WP_072353822.1    Uniprot ID   -
Organism   Staphylococcus aureus strain NT_611     
Function   dsDNA binding to the cell surface (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1639175..1649861
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KZZ50_RS07945 (KZZ50_07930) rpsT 1640089..1640340 (+) 252 WP_001274017.1 30S ribosomal protein S20 -
  KZZ50_RS07950 (KZZ50_07935) holA 1640385..1641359 (-) 975 WP_001282570.1 DNA polymerase III subunit delta -
  KZZ50_RS07955 (KZZ50_07940) comEC 1641416..1643617 (-) 2202 WP_172838642.1 DNA internalization-related competence protein ComEC/Rec2 Machinery gene
  KZZ50_RS07960 (KZZ50_07945) - 1643622..1644083 (-) 462 WP_000439693.1 ComE operon protein 2 -
  KZZ50_RS07965 (KZZ50_07950) comEA 1644175..1644861 (-) 687 WP_072353822.1 ComEA family DNA-binding protein Machinery gene
  KZZ50_RS07970 (KZZ50_07955) - 1644901..1645617 (-) 717 WP_000084829.1 class I SAM-dependent methyltransferase -
  KZZ50_RS07975 (KZZ50_07960) rsfS 1645620..1645973 (-) 354 WP_001088020.1 ribosome silencing factor -
  KZZ50_RS07980 (KZZ50_07965) yqeK 1645974..1646558 (-) 585 WP_001019320.1 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK -
  KZZ50_RS07985 (KZZ50_07970) nadD 1646548..1647117 (-) 570 WP_000725162.1 nicotinate (nicotinamide) nucleotide adenylyltransferase -
  KZZ50_RS07990 (KZZ50_07975) yhbY 1647120..1647410 (-) 291 WP_000955231.1 ribosome assembly RNA-binding protein YhbY -
  KZZ50_RS07995 (KZZ50_07980) aroE 1647414..1648220 (-) 807 WP_000666748.1 shikimate dehydrogenase -
  KZZ50_RS08000 (KZZ50_07985) yqeH 1648234..1649334 (-) 1101 WP_001280141.1 ribosome biogenesis GTPase YqeH -

Sequence

Protein


Download         Length: 228 a.a.        Molecular weight: 25773.50 Da        Isoelectric Point: 9.6753

>NTDB_id=591718 KZZ50_RS07965 WP_072353822.1 1644175..1644861(-) (comEA) [Staphylococcus aureus strain NT_611]
MVLLYQFLLRYKDFLTQWKLYIISAVVLIMVLIGFIFWRQDDYTSRNFENKDTALKQSTSENSSLSKVEDVQVKDGDNSK
NKGPVYVDVKGAVKHPNVYKMTSKDRVVDLLDKAQLLEDADVSQINLSEKLTDQKMIFIPHKGQKNVEPQIGVNSVHVKN
GNTNNTKVNLNTASVSELMSVPGVGQAKANAIVEYRNQQGAFQEIDDLKKVKGFGSKTFDKLKSYFTI

Nucleotide


Download         Length: 687 bp        

>NTDB_id=591718 KZZ50_RS07965 WP_072353822.1 1644175..1644861(-) (comEA) [Staphylococcus aureus strain NT_611]
GTGGTTTTATTGTATCAATTTTTATTACGCTATAAAGATTTTTTAACTCAATGGAAGTTATATATTATAAGTGCTGTTGT
TTTAATTATGGTATTAATTGGTTTTATATTCTGGAGACAAGATGATTATACTTCAAGAAATTTTGAAAATAAAGATACTG
CTCTGAAACAAAGCACTAGTGAAAATAGTAGTTTGTCCAAAGTAGAAGATGTCCAGGTCAAAGATGGAGATAATTCCAAA
AATAAGGGTCCTGTATATGTCGATGTAAAAGGTGCTGTTAAACATCCTAATGTTTATAAAATGACATCTAAGGATAGAGT
AGTTGATTTACTTGATAAAGCACAATTATTGGAGGATGCAGATGTAAGTCAAATTAATTTGTCTGAAAAATTAACAGATC
AAAAAATGATTTTCATACCTCATAAAGGACAAAAGAATGTTGAACCACAAATTGGAGTAAACAGTGTGCATGTAAAAAAT
GGGAACACAAATAATACTAAAGTAAATTTAAATACCGCATCTGTATCAGAATTGATGTCTGTTCCTGGAGTAGGGCAAGC
TAAAGCTAATGCAATTGTTGAATATCGCAACCAACAAGGTGCATTTCAAGAAATTGACGATTTGAAAAAAGTAAAAGGTT
TTGGAAGTAAAACTTTTGATAAACTGAAATCTTATTTCACGATATAA

Domains

Predicted by InterproScan.

Helix-hairpin-helix motif (HHH_3)

(164-227)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comEA Staphylococcus aureus MW2

99.561

100

0.996
  comEA Staphylococcus aureus N315

97.807

100

0.978