Detailed information    

insolico Bioinformatically predicted

Overview

Name   comEA   Type   Machinery gene
Locus tag   KZW87_RS08675 Genome accession   NZ_CP080222
Coordinates   1736273..1736959 (-) Length   228 a.a.
NCBI ID   WP_072361794.1    Uniprot ID   -
Organism   Staphylococcus aureus strain NT_8     
Function   dsDNA binding to the cell surface (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1731273..1741959
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KZW87_RS08655 (KZW87_08625) rpsT 1732187..1732438 (+) 252 WP_001274017.1 30S ribosomal protein S20 -
  KZW87_RS08660 (KZW87_08630) holA 1732483..1733457 (-) 975 WP_031587652.1 DNA polymerase III subunit delta -
  KZW87_RS08665 (KZW87_08635) comEC 1733514..1735715 (-) 2202 WP_025174327.1 DNA internalization-related competence protein ComEC/Rec2 Machinery gene
  KZW87_RS08670 (KZW87_08640) - 1735720..1736181 (-) 462 WP_000439693.1 ComE operon protein 2 -
  KZW87_RS08675 (KZW87_08645) comEA 1736273..1736959 (-) 687 WP_072361794.1 ComEA family DNA-binding protein Machinery gene
  KZW87_RS08680 (KZW87_08650) - 1736999..1737715 (-) 717 WP_000084822.1 class I SAM-dependent methyltransferase -
  KZW87_RS08685 (KZW87_08655) rsfS 1737718..1738071 (-) 354 WP_001088020.1 ribosome silencing factor -
  KZW87_RS08690 (KZW87_08660) yqeK 1738072..1738656 (-) 585 WP_001019326.1 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK -
  KZW87_RS08695 (KZW87_08665) nadD 1738646..1739215 (-) 570 WP_000725162.1 nicotinate (nicotinamide) nucleotide adenylyltransferase -
  KZW87_RS08700 (KZW87_08670) yhbY 1739218..1739508 (-) 291 WP_000627815.1 ribosome assembly RNA-binding protein YhbY -
  KZW87_RS08705 (KZW87_08675) aroE 1739512..1740318 (-) 807 WP_000666761.1 shikimate dehydrogenase -
  KZW87_RS08710 (KZW87_08680) - 1740332..1740565 (-) 234 Protein_1721 ribosome biogenesis GTPase YqeH -
  KZW87_RS08715 (KZW87_08685) yqeH 1740595..1741695 (-) 1101 WP_001280141.1 ribosome biogenesis GTPase YqeH -

Sequence

Protein


Download         Length: 228 a.a.        Molecular weight: 25863.49 Da        Isoelectric Point: 9.3305

>NTDB_id=591469 KZW87_RS08675 WP_072361794.1 1736273..1736959(-) (comEA) [Staphylococcus aureus strain NT_8]
MVLLYQFLLRYKDFLTQWKLYIISAVVLIMVLIGFIFWRQDDYTSRNFENKDTALKQSTSENSSLSKVEDVQVKDGDNSK
NKGPVYVDVKGAVKHPNVYKMTSKDRVVDLLDKAQLLEDADVSQINLSEKLTDQKMIFIPHKGQKNVEPQIEVNSVHEKN
GNTNNTKVNLNTASVSELMSVPGVGQAKANAIVEYRNQQGAFQEIDDLKKVKGFGSKTFDKLKSYFTT

Nucleotide


Download         Length: 687 bp        

>NTDB_id=591469 KZW87_RS08675 WP_072361794.1 1736273..1736959(-) (comEA) [Staphylococcus aureus strain NT_8]
GTGGTTTTATTGTATCAATTTTTATTACGCTATAAAGATTTTTTAACTCAATGGAAGTTATATATTATAAGTGCTGTTGT
TTTAATTATGGTATTAATTGGTTTTATATTCTGGAGACAAGATGATTATACTTCAAGAAATTTTGAAAATAAAGATACTG
CTCTGAAACAAAGCACTAGTGAAAATAGTAGTTTGTCCAAAGTAGAAGATGTCCAGGTCAAAGATGGAGATAATTCCAAA
AATAAGGGTCCTGTATATGTCGATGTAAAAGGTGCTGTTAAACATCCTAATGTTTATAAAATGACATCTAAGGATAGAGT
AGTTGATTTACTTGATAAAGCACAATTATTGGAGGATGCAGATGTAAGTCAAATTAATTTGTCTGAAAAATTAACAGATC
AAAAAATGATTTTCATACCTCATAAAGGACAAAAGAATGTTGAACCACAAATTGAAGTAAACAGTGTGCACGAAAAAAAT
GGGAACACAAATAATACTAAAGTAAATTTAAATACGGCATCTGTATCAGAATTGATGTCTGTTCCTGGAGTTGGGCAAGC
TAAAGCTAATGCAATTGTTGAATATCGCAACCAACAAGGTGCATTTCAAGAAATTGACGATTTGAAAAAAGTAAAAGGTT
TTGGAAGTAAAACTTTTGATAAACTGAAATCTTATTTCACGACATAA

Domains

Predicted by InterproScan.

Helix-hairpin-helix motif (HHH_3)

(164-227)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comEA Staphylococcus aureus MW2

98.678

99.561

0.982
  comEA Staphylococcus aureus N315

97.797

99.561

0.974