Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   KZP24_RS20170 Genome accession   NZ_CP080028
Coordinates   3931541..3931726 (+) Length   61 a.a.
NCBI ID   WP_260838808.1    Uniprot ID   -
Organism   Heyndrickxia oleronia strain DSM 9356     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 3926541..3936726
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KZP24_RS20150 - 3928374..3928556 (-) 183 WP_058004794.1 YjzD family protein -
  KZP24_RS20155 - 3928815..3929531 (+) 717 WP_071976847.1 alpha/beta fold hydrolase -
  KZP24_RS20160 - 3929662..3930453 (+) 792 WP_071976848.1 hypothetical protein -
  KZP24_RS20165 med 3930566..3931513 (+) 948 WP_058004797.1 BMP family ABC transporter substrate-binding protein Regulator
  KZP24_RS20170 comZ 3931541..3931726 (+) 186 WP_260838808.1 ComZ family protein Regulator
  KZP24_RS20175 - 3931853..3932170 (-) 318 WP_058004799.1 hypothetical protein -
  KZP24_RS20180 - 3932432..3933370 (+) 939 WP_058004800.1 beta-ketoacyl-ACP synthase III -
  KZP24_RS20185 fabF 3933510..3934745 (+) 1236 WP_071976850.1 beta-ketoacyl-ACP synthase II -
  KZP24_RS20190 - 3934938..3935729 (+) 792 WP_079991289.1 DUF2268 domain-containing protein -

Sequence

Protein


Download         Length: 61 a.a.        Molecular weight: 7134.30 Da        Isoelectric Point: 4.3189

>NTDB_id=590815 KZP24_RS20170 WP_260838808.1 3931541..3931726(+) (comZ) [Heyndrickxia oleronia strain DSM 9356]
MNQDKSMEFMQIAMKYLPEQAKEKLDQAGVEISFELLQPFMELFTKVMNEAYELGKNDALK

Nucleotide


Download         Length: 186 bp        

>NTDB_id=590815 KZP24_RS20170 WP_260838808.1 3931541..3931726(+) (comZ) [Heyndrickxia oleronia strain DSM 9356]
ATGAATCAAGACAAATCGATGGAATTTATGCAAATAGCAATGAAATACTTACCAGAGCAAGCAAAAGAAAAATTGGATCA
AGCAGGAGTGGAGATTTCCTTTGAATTGCTTCAACCTTTTATGGAATTATTCACTAAGGTGATGAATGAAGCGTATGAGC
TTGGAAAAAATGATGCATTAAAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-59)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

67.797

96.721

0.656