Detailed information    

insolico Bioinformatically predicted

Overview

Name   med   Type   Regulator
Locus tag   KZP24_RS20165 Genome accession   NZ_CP080028
Coordinates   3930566..3931513 (+) Length   315 a.a.
NCBI ID   WP_058004797.1    Uniprot ID   A0A8E2I3L8
Organism   Heyndrickxia oleronia strain DSM 9356     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 3925566..3936513
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KZP24_RS26645 clpB 3925667..3928265 (+) 2599 Protein_3850 ATP-dependent chaperone ClpB -
  KZP24_RS20150 - 3928374..3928556 (-) 183 WP_058004794.1 YjzD family protein -
  KZP24_RS20155 - 3928815..3929531 (+) 717 WP_071976847.1 alpha/beta fold hydrolase -
  KZP24_RS20160 - 3929662..3930453 (+) 792 WP_071976848.1 hypothetical protein -
  KZP24_RS20165 med 3930566..3931513 (+) 948 WP_058004797.1 BMP family ABC transporter substrate-binding protein Regulator
  KZP24_RS20170 comZ 3931541..3931726 (+) 186 WP_260838808.1 ComZ family protein Regulator
  KZP24_RS20175 - 3931853..3932170 (-) 318 WP_058004799.1 hypothetical protein -
  KZP24_RS20180 - 3932432..3933370 (+) 939 WP_058004800.1 beta-ketoacyl-ACP synthase III -
  KZP24_RS20185 fabF 3933510..3934745 (+) 1236 WP_071976850.1 beta-ketoacyl-ACP synthase II -
  KZP24_RS20190 - 3934938..3935729 (+) 792 WP_079991289.1 DUF2268 domain-containing protein -

Sequence

Protein


Download         Length: 315 a.a.        Molecular weight: 35261.39 Da        Isoelectric Point: 7.8955

>NTDB_id=590814 KZP24_RS20165 WP_058004797.1 3930566..3931513(+) (med) [Heyndrickxia oleronia strain DSM 9356]
MIKKLFIIIACILLLSSCSNRVDKGKLNKVGMLVPETINDQVWGTKGYKGLLNIQNDFDVDVYYKEGIENASAIEHAVSE
FKQKNVNLIFGHGFEYADTFNKIAKKYPTIHFVSFNGDATQKNTTSLRFEGHAMGFFGGMTAAHMSTTKKIGIIATHSWQ
PEIKGFVEGAKYEDPNITVLLKYTDNWDDGQKAVGLLDKLLDEEVDVVYPAGDGFNVPVIEKIKEKGLYAIGYVSDQSDL
GKNTVLTSTIQQASKLYDIVAKKYAEGTLQSGNLSFDFQDGVIEMGKFSPRVDEKFQRKMKRFVKKYKETGDLPK

Nucleotide


Download         Length: 948 bp        

>NTDB_id=590814 KZP24_RS20165 WP_058004797.1 3930566..3931513(+) (med) [Heyndrickxia oleronia strain DSM 9356]
ATGATAAAAAAGTTATTCATTATCATTGCCTGTATATTACTTTTATCAAGTTGCTCAAATAGGGTTGATAAAGGTAAACT
TAACAAGGTAGGAATGTTAGTACCTGAAACAATCAATGATCAAGTCTGGGGAACAAAAGGGTATAAGGGTCTGTTGAATA
TCCAAAATGACTTTGATGTCGATGTCTATTATAAAGAAGGAATTGAAAACGCATCTGCCATCGAACATGCAGTCAGTGAA
TTTAAACAAAAAAATGTAAATTTAATTTTTGGTCATGGATTTGAGTATGCGGATACGTTTAATAAAATTGCTAAAAAATA
TCCTACTATTCATTTCGTTAGCTTCAATGGGGATGCAACACAAAAAAATACAACTAGTTTAAGATTTGAAGGCCATGCAA
TGGGTTTTTTTGGTGGGATGACGGCAGCACATATGTCAACCACAAAAAAAATAGGTATTATTGCAACACATAGTTGGCAG
CCGGAAATTAAAGGATTTGTTGAAGGCGCAAAATATGAGGATCCAAATATTACCGTCTTATTAAAGTATACTGATAATTG
GGATGATGGACAAAAAGCTGTAGGGCTTTTGGACAAATTATTAGATGAAGAAGTAGATGTGGTATACCCAGCTGGCGATG
GCTTTAATGTACCGGTCATTGAAAAAATTAAAGAAAAAGGTCTATATGCAATAGGCTATGTTTCAGATCAATCGGATTTA
GGGAAAAATACAGTTCTAACAAGTACGATTCAACAAGCAAGTAAGCTTTATGATATTGTCGCAAAAAAATATGCAGAGGG
TACTCTCCAATCAGGGAATCTTTCATTTGACTTCCAAGATGGTGTAATAGAAATGGGGAAATTCAGTCCCCGGGTTGACG
AAAAATTTCAAAGGAAAATGAAACGTTTTGTCAAAAAATATAAAGAAACAGGAGACTTACCAAAGTAA

Domains

Predicted by InterproScan.

ABC transporter substrate-binding protein PnrA-like (Bmp)

(29-314)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  med Bacillus subtilis subsp. subtilis str. 168

56.825

100

0.568