Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | KYI11_RS07620 | Genome accession | NZ_CP079981 |
| Coordinates | 1465676..1466644 (-) | Length | 322 a.a. |
| NCBI ID | WP_188017276.1 | Uniprot ID | A0AAE7Q585 |
| Organism | Macrococcoides bohemicum strain 19Msa0936 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1460676..1471644
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KYI11_RS07590 (KYI11_07600) | gcvT | 1461328..1462413 (-) | 1086 | WP_219504121.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| KYI11_RS07595 (KYI11_07605) | - | 1462550..1463056 (-) | 507 | WP_096076367.1 | shikimate kinase | - |
| KYI11_RS07600 (KYI11_07610) | - | 1463237..1463683 (-) | 447 | WP_157742171.1 | competence type IV pilus minor pilin ComGF | - |
| KYI11_RS07605 (KYI11_07615) | - | 1463863..1464333 (-) | 471 | WP_219502504.1 | hypothetical protein | - |
| KYI11_RS07610 (KYI11_07620) | comGC | 1464281..1464640 (-) | 360 | WP_096076364.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| KYI11_RS07615 (KYI11_07625) | comGB | 1464652..1465689 (-) | 1038 | WP_165958576.1 | competence type IV pilus assembly protein ComGB | - |
| KYI11_RS07620 (KYI11_07630) | comGA | 1465676..1466644 (-) | 969 | WP_188017276.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| KYI11_RS07625 (KYI11_07635) | - | 1466854..1467102 (+) | 249 | WP_096076361.1 | DUF2626 domain-containing protein | - |
| KYI11_RS07630 (KYI11_07640) | - | 1467128..1467757 (-) | 630 | WP_133353337.1 | MBL fold metallo-hydrolase | - |
| KYI11_RS07635 (KYI11_07645) | - | 1467850..1468089 (+) | 240 | WP_096076359.1 | DUF2759 domain-containing protein | - |
| KYI11_RS07640 (KYI11_07650) | - | 1468126..1468437 (-) | 312 | WP_096076358.1 | MTH1187 family thiamine-binding protein | - |
| KYI11_RS07645 (KYI11_07655) | - | 1468437..1469408 (-) | 972 | WP_096076357.1 | ROK family glucokinase | - |
| KYI11_RS07650 (KYI11_07660) | - | 1469405..1469596 (-) | 192 | WP_096076356.1 | YqgQ family protein | - |
| KYI11_RS07655 (KYI11_07665) | - | 1469601..1471025 (-) | 1425 | WP_096076355.1 | rhomboid family intramembrane serine protease | - |
| KYI11_RS07660 (KYI11_07670) | - | 1471022..1471588 (-) | 567 | WP_203545540.1 | 5-formyltetrahydrofolate cyclo-ligase | - |
Sequence
Protein
Download Length: 322 a.a. Molecular weight: 36746.65 Da Isoelectric Point: 7.5532
>NTDB_id=590581 KYI11_RS07620 WP_188017276.1 1465676..1466644(-) (comGA) [Macrococcoides bohemicum strain 19Msa0936]
MEKLLHTILDDAIAKKTSDVHFIPEVKNVMMKFRIGGNMYAYNQLNTEDFEKLLSYVKFITHLDVSEKNKAQSGILTYQK
DKILYNIRASTLPHTIGQEACVMRIIPALFSQNISIEQELLSLMHKGSGLILISGPTGSGKSTLMYQMLNYAAQNLNKQI
ISIEDPVEQRIHGMIQINVNRKANITYQNAIKAILRCDPDIIMIGEIRDIETAKHVINASLSGHLVLSTLHANTCLGAIH
RLLEMGITKVELEQCVEIIINQRLVNTTSARTRIFEQLIKGDVRDYLNDRKVQHYHPLSEQLQVLYDKEKITQLEYERYA
LE
MEKLLHTILDDAIAKKTSDVHFIPEVKNVMMKFRIGGNMYAYNQLNTEDFEKLLSYVKFITHLDVSEKNKAQSGILTYQK
DKILYNIRASTLPHTIGQEACVMRIIPALFSQNISIEQELLSLMHKGSGLILISGPTGSGKSTLMYQMLNYAAQNLNKQI
ISIEDPVEQRIHGMIQINVNRKANITYQNAIKAILRCDPDIIMIGEIRDIETAKHVINASLSGHLVLSTLHANTCLGAIH
RLLEMGITKVELEQCVEIIINQRLVNTTSARTRIFEQLIKGDVRDYLNDRKVQHYHPLSEQLQVLYDKEKITQLEYERYA
LE
Nucleotide
Download Length: 969 bp
>NTDB_id=590581 KYI11_RS07620 WP_188017276.1 1465676..1466644(-) (comGA) [Macrococcoides bohemicum strain 19Msa0936]
ATGGAAAAACTATTACATACAATATTGGATGATGCAATTGCTAAAAAAACTTCAGATGTACACTTTATACCTGAAGTGAA
GAATGTCATGATGAAATTCAGGATTGGAGGTAATATGTATGCCTATAATCAGTTAAATACCGAAGACTTCGAAAAATTAT
TATCATATGTAAAATTTATAACACATCTTGATGTTTCTGAAAAAAATAAAGCGCAGAGCGGTATACTGACCTATCAGAAG
GACAAAATACTTTATAATATCAGGGCATCTACATTACCACATACGATTGGACAGGAAGCATGTGTGATGCGAATAATTCC
AGCTTTATTTAGTCAAAATATTTCGATTGAACAGGAATTATTATCTTTGATGCATAAAGGAAGCGGATTAATTCTAATTA
GTGGTCCTACTGGAAGCGGCAAAAGTACTTTAATGTACCAAATGTTAAATTATGCTGCACAAAATTTAAATAAACAGATT
ATATCGATTGAAGATCCTGTTGAACAGAGAATTCATGGTATGATTCAAATCAATGTGAATAGAAAAGCTAATATAACATA
TCAGAATGCAATAAAGGCTATTCTTCGCTGTGATCCGGATATTATTATGATAGGAGAGATCCGTGATATAGAAACTGCAA
AACATGTCATCAATGCAAGTTTAAGTGGTCATCTTGTGCTGTCGACACTTCATGCAAATACATGTCTTGGCGCTATCCAT
CGATTGCTGGAAATGGGAATAACAAAAGTTGAACTTGAACAGTGTGTAGAAATAATCATTAATCAGCGATTAGTTAATAC
TACATCAGCGCGAACACGTATTTTTGAACAGTTGATTAAAGGCGATGTACGGGATTATTTAAATGATAGAAAGGTTCAGC
ATTATCATCCTTTATCTGAACAATTGCAAGTTTTGTACGACAAAGAAAAGATTACGCAGCTGGAGTATGAACGTTATGCT
TTGGAATAG
ATGGAAAAACTATTACATACAATATTGGATGATGCAATTGCTAAAAAAACTTCAGATGTACACTTTATACCTGAAGTGAA
GAATGTCATGATGAAATTCAGGATTGGAGGTAATATGTATGCCTATAATCAGTTAAATACCGAAGACTTCGAAAAATTAT
TATCATATGTAAAATTTATAACACATCTTGATGTTTCTGAAAAAAATAAAGCGCAGAGCGGTATACTGACCTATCAGAAG
GACAAAATACTTTATAATATCAGGGCATCTACATTACCACATACGATTGGACAGGAAGCATGTGTGATGCGAATAATTCC
AGCTTTATTTAGTCAAAATATTTCGATTGAACAGGAATTATTATCTTTGATGCATAAAGGAAGCGGATTAATTCTAATTA
GTGGTCCTACTGGAAGCGGCAAAAGTACTTTAATGTACCAAATGTTAAATTATGCTGCACAAAATTTAAATAAACAGATT
ATATCGATTGAAGATCCTGTTGAACAGAGAATTCATGGTATGATTCAAATCAATGTGAATAGAAAAGCTAATATAACATA
TCAGAATGCAATAAAGGCTATTCTTCGCTGTGATCCGGATATTATTATGATAGGAGAGATCCGTGATATAGAAACTGCAA
AACATGTCATCAATGCAAGTTTAAGTGGTCATCTTGTGCTGTCGACACTTCATGCAAATACATGTCTTGGCGCTATCCAT
CGATTGCTGGAAATGGGAATAACAAAAGTTGAACTTGAACAGTGTGTAGAAATAATCATTAATCAGCGATTAGTTAATAC
TACATCAGCGCGAACACGTATTTTTGAACAGTTGATTAAAGGCGATGTACGGGATTATTTAAATGATAGAAAGGTTCAGC
ATTATCATCCTTTATCTGAACAATTGCAAGTTTTGTACGACAAAGAAAAGATTACGCAGCTGGAGTATGAACGTTATGCT
TTGGAATAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Staphylococcus aureus MW2 |
53.055 |
96.584 |
0.512 |
| comGA | Staphylococcus aureus N315 |
53.055 |
96.584 |
0.512 |