Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   HV822_RS09735 Genome accession   NZ_CP079801
Coordinates   2115549..2115962 (+) Length   137 a.a.
NCBI ID   WP_238869801.1    Uniprot ID   -
Organism   Halopseudomonas maritima strain RR6     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 2110549..2120962
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HV822_RS09705 (HV822_09690) - 2110683..2111678 (-) 996 WP_118131860.1 aspartate carbamoyltransferase catalytic subunit -
  HV822_RS09710 (HV822_09695) pyrR 2111686..2112195 (-) 510 WP_238869797.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  HV822_RS09715 (HV822_09700) ruvX 2112204..2112632 (-) 429 WP_238869798.1 Holliday junction resolvase RuvX -
  HV822_RS09720 (HV822_09705) - 2112632..2113189 (-) 558 WP_238869799.1 YqgE/AlgH family protein -
  HV822_RS09725 (HV822_09710) - 2113330..2114226 (-) 897 WP_238873579.1 energy transducer TonB -
  HV822_RS09730 (HV822_09715) gshB 2114370..2115323 (-) 954 WP_238869800.1 glutathione synthase -
  HV822_RS09735 (HV822_09720) pilG 2115549..2115962 (+) 414 WP_238869801.1 PleD family two-component system response regulator Regulator
  HV822_RS09740 (HV822_09725) pilH 2116001..2116366 (+) 366 WP_083725030.1 twitching motility response regulator PilH -
  HV822_RS09745 (HV822_09730) - 2116418..2116954 (+) 537 WP_238869802.1 chemotaxis protein CheW -
  HV822_RS09750 (HV822_09735) - 2117045..2119084 (+) 2040 WP_238869803.1 methyl-accepting chemotaxis protein -
  HV822_RS09755 (HV822_09740) - 2119141..2120022 (+) 882 WP_275419342.1 protein-glutamate O-methyltransferase CheR -

Sequence

Protein


Download         Length: 137 a.a.        Molecular weight: 14855.22 Da        Isoelectric Point: 7.1348

>NTDB_id=589563 HV822_RS09735 WP_238869801.1 2115549..2115962(+) (pilG) [Halopseudomonas maritima strain RR6]
MEENFESLKVMVIDDSKTIRRTAETLLKKVGCTVITAVDGFDALAKIADNHPDIIFVDIMMPRLDGYQTCALIKNNSAFR
ATPVIMLSSKDGLFDKAKGRIVGSDQYLTKPFSKEELLGAIRAHVPQPSNVAGAAGA

Nucleotide


Download         Length: 414 bp        

>NTDB_id=589563 HV822_RS09735 WP_238869801.1 2115549..2115962(+) (pilG) [Halopseudomonas maritima strain RR6]
ATGGAAGAAAATTTCGAGAGCCTGAAGGTCATGGTGATTGACGATAGCAAGACGATTCGACGCACAGCAGAAACCCTGCT
GAAGAAAGTCGGATGTACCGTCATCACCGCGGTCGACGGCTTTGACGCGCTGGCCAAGATTGCCGACAACCACCCGGATA
TCATTTTTGTCGACATCATGATGCCCCGCCTGGACGGCTATCAGACCTGCGCGTTGATCAAGAACAATAGCGCCTTTCGG
GCTACACCGGTGATCATGCTGTCCAGCAAGGATGGCCTGTTCGACAAGGCCAAGGGCCGCATTGTCGGGTCTGACCAGTA
CCTGACCAAACCCTTTAGCAAGGAAGAGCTGCTGGGTGCCATCCGCGCCCACGTACCGCAGCCCAGTAACGTGGCCGGCG
CCGCTGGCGCCTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

78.4

91.241

0.715
  vicR Streptococcus mutans UA159

41.406

93.431

0.387