Detailed information    

insolico Bioinformatically predicted

Overview

Name   phrF   Type   Regulator
Locus tag   KXZ66_RS19755 Genome accession   NZ_CP079759
Coordinates   3820488..3820607 (+) Length   39 a.a.
NCBI ID   WP_085185514.1    Uniprot ID   -
Organism   Bacillus sp. LJBS17     
Function   antagonize RapF (predicted from homology)   
Competence regulation

Genomic Context

Location: 3815488..3825607
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KXZ66_RS19735 (KXZ66_19730) albG 3815652..3816353 (+) 702 WP_085185518.1 antilisterial bacteriocin subtilosin biosynthesis protein AlbG -
  KXZ66_RS19740 (KXZ66_19735) - 3816359..3817735 (-) 1377 WP_151869991.1 YncE family protein -
  KXZ66_RS19745 (KXZ66_19740) - 3817774..3819129 (-) 1356 WP_038829813.1 YncE family protein -
  KXZ66_RS22780 - 3819126..3819356 (-) 231 Protein_3867 hypothetical protein -
  KXZ66_RS19750 (KXZ66_19745) rapF 3819359..3820504 (+) 1146 WP_021480843.1 response regulator aspartate phosphatase RapF Regulator
  KXZ66_RS19755 (KXZ66_19750) phrF 3820488..3820607 (+) 120 WP_085185514.1 phosphatase RapF inhibitor PhrF Regulator
  KXZ66_RS19760 (KXZ66_19755) - 3820834..3821310 (+) 477 WP_015384936.1 hypothetical protein -
  KXZ66_RS19765 (KXZ66_19760) - 3821570..3822256 (+) 687 WP_241495663.1 hypothetical protein -
  KXZ66_RS19770 (KXZ66_19765) - 3823732..3824379 (+) 648 WP_151869990.1 ABC transporter ATP-binding protein -
  KXZ66_RS19775 (KXZ66_19770) - 3824372..3824935 (+) 564 WP_015483840.1 hypothetical protein -

Sequence

Protein


Download         Length: 39 a.a.        Molecular weight: 4259.20 Da        Isoelectric Point: 10.4997

>NTDB_id=589356 KXZ66_RS19755 WP_085185514.1 3820488..3820607(+) (phrF) [Bacillus sp. LJBS17]
MKLKSKLLLFCLALSTVFVATTIANAPTHQIEVAQRGMI

Nucleotide


Download         Length: 120 bp        

>NTDB_id=589356 KXZ66_RS19755 WP_085185514.1 3820488..3820607(+) (phrF) [Bacillus sp. LJBS17]
ATGAAATTGAAGTCTAAACTATTACTCTTTTGTCTGGCTCTAAGCACTGTGTTCGTGGCAACAACTATTGCAAATGCACC
TACACACCAAATTGAAGTTGCACAACGAGGAATGATTTAA

Domains

Predicted by InterproScan.

Rap-phr extracellular signalling (PhrC_PhrF)

(3-39)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  phrF Bacillus subtilis subsp. subtilis str. 168

97.436

100

0.974
  phrC Bacillus subtilis subsp. subtilis str. 168

48.718

100

0.487