Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   KX728_RS04520 Genome accession   NZ_CP079724
Coordinates   903564..904373 (+) Length   269 a.a.
NCBI ID   WP_001290610.1    Uniprot ID   -
Organism   Streptococcus oralis strain 34     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 898564..909373
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KX728_RS04500 (KX728_04495) pta 899221..900195 (+) 975 WP_049478210.1 phosphate acetyltransferase -
  KX728_RS04505 (KX728_04500) mutY 900278..901456 (+) 1179 WP_000886126.1 A/G-specific adenine glycosylase -
  KX728_RS04510 (KX728_04505) micA 901513..902220 (+) 708 WP_000722058.1 response regulator YycF Regulator
  KX728_RS04515 (KX728_04510) micB 902213..903562 (+) 1350 WP_000568721.1 cell wall metabolism sensor histidine kinase VicK Regulator
  KX728_RS04520 (KX728_04515) vicX 903564..904373 (+) 810 WP_001290610.1 MBL fold metallo-hydrolase Regulator
  KX728_RS04525 (KX728_04520) - 904480..906351 (+) 1872 WP_000150976.1 Eco57I restriction-modification methylase domain-containing protein -

Sequence

Protein


Download         Length: 269 a.a.        Molecular weight: 29951.93 Da        Isoelectric Point: 6.3426

>NTDB_id=588977 KX728_RS04520 WP_001290610.1 903564..904373(+) (vicX) [Streptococcus oralis strain 34]
MSEKGFKYSILASGSSGNSFYLETPKKKILVDAGLSGKKITSLLSEINRKPEDLDAILITHEHSDHIHGVGVLARKYGMD
LYANEKTWQAMENSKYLGKVDSSQKHIFEMGKTKTFGDIDIESFGVSHDAAAPQFYRFMKDDKSFVMLTDTGYVSDRMAG
IVENADGYLIESNHDVEILRAGSYAWRLKQRILSDLGHLSNEDGAEAMIRTMGNRTKKIYLGHLSKENNIKELAHMTMVN
QLAQADLGVGVDFKVYDTSPDTATPLTDI

Nucleotide


Download         Length: 810 bp        

>NTDB_id=588977 KX728_RS04520 WP_001290610.1 903564..904373(+) (vicX) [Streptococcus oralis strain 34]
ATGAGTGAAAAAGGCTTTAAATACAGTATTTTAGCATCAGGTTCCAGTGGAAATTCCTTTTATCTGGAAACCCCAAAAAA
GAAAATCCTAGTAGATGCAGGCCTGTCTGGTAAGAAAATTACAAGTCTTTTGAGTGAAATCAATCGTAAACCTGAAGATT
TGGATGCGATTTTGATTACGCATGAGCATTCAGACCATATTCATGGAGTCGGTGTCTTGGCTCGCAAATATGGCATGGAC
CTTTACGCCAATGAAAAGACTTGGCAGGCTATGGAAAATAGCAAGTACCTCGGTAAGGTGGACTCTTCGCAGAAGCATAT
CTTTGAAATGGGCAAAACCAAAACCTTTGGCGATATCGACATTGAGAGTTTTGGGGTTAGCCATGATGCGGCAGCACCAC
AGTTTTACCGCTTTATGAAGGATGACAAGAGTTTTGTCATGTTGACCGATACAGGTTATGTAAGTGACCGTATGGCTGGA
ATAGTCGAAAATGCTGACGGTTACCTCATCGAGTCCAACCACGATGTAGAGATTTTGCGAGCAGGATCTTACGCTTGGCG
TCTCAAACAGCGAATTCTATCGGATCTCGGTCATCTTTCTAACGAAGACGGTGCTGAGGCCATGATTCGTACAATGGGAA
ATCGGACTAAGAAAATCTATCTTGGGCATTTATCCAAAGAGAACAATATCAAGGAGCTGGCTCATATGACTATGGTCAAC
CAGCTAGCCCAAGCGGATCTGGGAGTCGGAGTAGACTTTAAAGTTTATGATACCTCACCAGATACTGCAACACCATTAAC
AGATATATAA

Domains

Predicted by InterproScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(15-223)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

77.695

100

0.777