Detailed information NTG0588877

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: KXY09_RS02045
• Genome accession: NZ_CP079719
• Coordinates: 405817..406965 (+)
• Length: 382 a.a.
• NCBI ID: WP_007410270.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain LABIM44
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 400817..411965

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KXY09_RS02025 (KXY09_02025)	-	401214..401897 (-)	684	WP_168985153.1	ABC transporter ATP-binding protein	-
KXY09_RS02030 (KXY09_02030)	-	401912..403348 (-)	1437	WP_085341729.1	ABC transporter permease	-
KXY09_RS02035 (KXY09_02035)	-	403561..404244 (+)	684	WP_160242544.1	response regulator transcription factor	-
KXY09_RS02040 (KXY09_02040)	-	404231..405664 (+)	1434	WP_162992601.1	HAMP domain-containing sensor histidine kinase	-
KXY09_RS02045 (KXY09_02045)	rapC	405817..406965 (+)	1149	WP_007410270.1	Rap family tetratricopeptide repeat protein	Regulator
KXY09_RS02050 (KXY09_02050)	phrC	406949..407068 (+)	120	WP_003156334.1	PhrC/PhrF family phosphatase-inhibitory pheromone	Regulator
KXY09_RS02055 (KXY09_02055)	-	407217..407327 (-)	111	WP_369719092.1	YjcZ family sporulation protein	-
KXY09_RS02060 (KXY09_02060)	-	407407..408771 (-)	1365	WP_136396097.1	aspartate kinase	-
KXY09_RS02065 (KXY09_02065)	ceuB	409185..410138 (+)	954	WP_059366593.1	ABC transporter permease	Machinery gene
KXY09_RS02070 (KXY09_02070)	-	410128..411075 (+)	948	WP_007410274.1	iron chelate uptake ABC transporter family permease subunit	-
KXY09_RS02075 (KXY09_02075)	-	411069..411827 (+)	759	WP_063096189.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 45475.70 Da
• Isoelectric Point: 4.9916

>NTDB_id=588877 KXY09_RS02045 WP_007410270.1 405817..406965(+) (rapC) [Bacillus velezensis strain LABIM44]
MKSGLIPSSAVGQKINEWYRYIRTFSVPDAEILKAEIKQELDHMEPDSNLVLYYSLMEFRHQLMLDYLEPLEKLKIEDQP
TLSEILDNIDNSQAGLKGLLDYYVNFFKGMFEFDKREFISAITYYKQAEKKLAFVSDHVERAEFYFKVAEAYYHMKQTYF
SLIHIKNAYEIYVEQDTYNVRIIQCHFVFGVNLMDERRFEQAAKHFQHALQMAEKEQKAQLVGRALYNLGLCYYNQDRIG
EAIPYFERAVDTFESQRIVNSLPQAYFLITLIYFKLGKKEKASEYHKRGYEYAKETDDPVYTVKFEWLQALYQAKPDEET
ISACFRYLEDKNLYADIEDLALEAAKYYYEQNCFKISSDYFLKVEEARKQIQRSEGLYEIEI

Nucleotide

• Length: 1149 bp

>NTDB_id=588877 KXY09_RS02045 WP_007410270.1 405817..406965(+) (rapC) [Bacillus velezensis strain LABIM44]
ATGAAGAGCGGGTTAATTCCTTCTTCAGCAGTCGGGCAGAAAATTAACGAGTGGTATCGATACATCAGAACATTCAGCGT
GCCGGATGCGGAGATCTTGAAGGCCGAGATCAAACAAGAGCTTGACCATATGGAGCCTGATTCGAACTTAGTGCTTTATT
ATTCCCTCATGGAATTTCGCCATCAGCTGATGCTGGATTACTTGGAGCCGCTGGAAAAACTGAAGATAGAAGACCAGCCG
ACCCTGTCGGAAATTCTTGATAACATTGATAACAGCCAGGCCGGCCTCAAAGGGCTTCTCGATTATTACGTCAACTTTTT
CAAAGGCATGTTTGAATTTGATAAAAGAGAATTTATCTCAGCGATTACATATTATAAACAAGCTGAGAAAAAACTGGCCT
TCGTATCGGACCACGTGGAACGGGCGGAGTTTTATTTTAAAGTGGCCGAAGCTTATTATCATATGAAACAAACGTATTTT
TCTTTGATACATATAAAAAACGCTTATGAAATTTACGTAGAGCAGGACACATATAACGTCCGGATCATTCAATGCCATTT
TGTATTCGGCGTCAATTTAATGGATGAAAGGCGCTTTGAACAGGCGGCCAAACATTTTCAGCACGCTCTGCAAATGGCCG
AAAAAGAACAAAAAGCGCAGCTTGTCGGGAGGGCGCTGTATAACCTCGGACTGTGCTACTACAATCAGGACCGCATCGGC
GAAGCGATTCCGTACTTTGAACGGGCGGTCGATACATTTGAATCACAAAGAATCGTCAATTCTCTTCCTCAAGCATATTT
TCTAATCACACTCATTTACTTTAAACTCGGAAAAAAAGAAAAAGCGTCGGAATATCACAAGCGGGGATATGAATATGCTA
AAGAAACAGACGATCCCGTTTACACGGTAAAATTCGAATGGCTGCAGGCTCTGTATCAGGCGAAACCGGATGAGGAAACA
ATCAGCGCGTGTTTCCGTTACCTGGAAGATAAAAATTTATACGCCGATATAGAGGATTTAGCACTAGAAGCAGCTAAATA
TTACTATGAACAAAATTGCTTTAAAATTTCTTCTGACTATTTTCTGAAAGTCGAAGAGGCAAGGAAACAAATACAAAGGA
GTGAAGGTTTGTATGAAATTGAAATCTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_12) (223-294)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (6-66)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	82.461	100	0.825
rapF	Bacillus subtilis subsp. subtilis str. 168	57.105	99.476	0.568