Detailed information NTG0058868

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: SA27298_RS09530
• Genome accession: NZ_AP018548
• Coordinates: 1939158..1940255 (+)
• Length: 365 a.a.
• NCBI ID: WP_003031554.1
• Uniprot ID: -
• Organism: Streptococcus anginosus strain CCUG 27928
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1934158..1945255

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SA27298_RS09505 (SA27298_1934)	pgsA	1934631..1935170 (-)	540	WP_003031585.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
SA27298_RS09510 (SA27298_1935)	rodZ	1935181..1936002 (-)	822	WP_003031547.1	cytoskeleton protein RodZ	-
SA27298_RS09515 (SA27298_1936)	-	1936061..1937356 (-)	1296	WP_003031544.1	pitrilysin family protein	-
SA27298_RS09520 (SA27298_1937)	-	1937356..1938603 (-)	1248	WP_018543659.1	pitrilysin family protein	-
SA27298_RS09525 (SA27298_1938)	yaaA	1938779..1939156 (+)	378	WP_003031580.1	S4 domain-containing protein YaaA	-
SA27298_RS09530 (SA27298_1939)	recF	1939158..1940255 (+)	1098	WP_003031554.1	DNA replication/repair protein RecF	Machinery gene
SA27298_RS09535 (SA27298_1940)	guaB	1940344..1941825 (-)	1482	WP_003030719.1	IMP dehydrogenase	-
SA27298_RS09540 (SA27298_1941)	trpS	1941956..1942981 (-)	1026	WP_003030728.1	tryptophan--tRNA ligase	-
SA27298_RS09545 (SA27298_1942)	galE	1943063..1944058 (-)	996	WP_003030726.1	UDP-glucose 4-epimerase GalE	-
SA27298_RS09550 (SA27298_1943)	-	1944079..1944768 (-)	690	WP_018543658.1	triose-phosphate isomerase	-

Sequence

Protein

• Length: 365 a.a.
• Molecular weight: 42034.39 Da
• Isoelectric Point: 8.8189

>NTDB_id=58868 SA27298_RS09530 WP_003031554.1 1939158..1940255(+) (recF) [Streptococcus anginosus strain CCUG 27928]
MWLKKLQIQHFRNYEATEIDFHSGLNIFLGQNAQGKTNILEAIYFLALTRSHRTRSDKDLIYFSKDTLKISGQLVKQTGN
ISLEIDLTPKGRITKVNHLKQSKLSDYVGNMNVVLFAPEDLQLIKGAPALRRKFIDIELGQIKPIYLSDLSHYHHVLKQR
NTYLKTAKTMDETFLAVLDDQLVEFGCRVMQHRIEFLKKLEHFGQQKHLELSSHLENLTIKYCSSVPLSDSNKLKESFQI
ALKQSRSRDLFKKNTGVGPHRDDIAFYINDMNANFGSQGQHRSVVLSLKLAEIELMETITKEKPILLLDDVMSELDNSRQ
LNLLETISQNIQTFMTTTTLEHLQNMPSNIKIFSIHEGHLTEDKV

Nucleotide

• Length: 1098 bp

>NTDB_id=58868 SA27298_RS09530 WP_003031554.1 1939158..1940255(+) (recF) [Streptococcus anginosus strain CCUG 27928]
ATGTGGTTAAAAAAGTTACAAATTCAACATTTTCGTAATTATGAAGCAACTGAAATAGATTTTCATTCTGGTCTCAATAT
TTTTCTAGGCCAAAATGCTCAAGGAAAAACAAATATCTTGGAAGCCATCTATTTTCTTGCATTGACACGAAGTCATCGAA
CTCGTTCAGACAAAGATTTAATTTATTTCTCCAAAGATACCCTGAAAATATCTGGACAACTTGTCAAGCAAACTGGAAAT
ATTTCTTTGGAAATCGACTTGACACCTAAAGGAAGAATTACAAAAGTTAATCATCTAAAACAAAGCAAACTATCTGATTA
TGTTGGAAATATGAATGTTGTTTTATTTGCTCCAGAAGATTTACAGTTGATTAAAGGAGCTCCAGCCCTTAGACGAAAAT
TTATTGATATAGAATTGGGGCAAATTAAACCAATCTATTTATCTGATTTATCACATTACCACCATGTCTTAAAACAAAGA
AATACTTATTTAAAAACAGCAAAAACAATGGATGAGACTTTTTTAGCAGTTTTAGATGATCAACTAGTAGAGTTTGGTTG
TCGTGTTATGCAGCATAGGATAGAATTTCTCAAAAAATTAGAGCACTTTGGTCAACAAAAGCATTTGGAACTCTCAAGTC
ATTTAGAAAACTTAACCATTAAGTACTGCTCTTCTGTTCCACTTTCAGATTCCAATAAGTTAAAAGAATCTTTCCAAATT
GCATTAAAGCAAAGCCGTAGTAGAGATTTATTTAAAAAAAATACTGGAGTTGGTCCCCATCGAGATGATATTGCTTTTTA
TATCAATGACATGAATGCCAATTTTGGTAGTCAAGGACAACATCGAAGCGTGGTTTTATCTCTCAAACTGGCAGAAATTG
AGCTCATGGAAACTATTACTAAAGAAAAACCAATTCTTCTACTTGACGATGTTATGAGTGAACTTGACAATAGTCGTCAA
CTTAATTTACTTGAAACTATTTCTCAAAATATCCAAACATTTATGACAACAACAACTCTAGAACATCTACAAAATATGCC
TTCTAATATTAAAATTTTCTCAATTCATGAAGGACATCTAACTGAAGACAAGGTGTAA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-358)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	72.905	98.082	0.715
recF	Bacillus subtilis subsp. subtilis str. 168	47.414	95.342	0.452