Detailed information
Bioinformatically predicted
Overview
| Name | comYH | Type | Machinery gene |
| Locus tag | KWY62_RS00745 | Genome accession | NZ_CP079193 |
| Coordinates | 119887..120840 (+) | Length | 317 a.a. |
| NCBI ID | WP_044776365.1 | Uniprot ID | - |
| Organism | Streptococcus suis strain ID41570 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 114887..125840
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KWY62_RS00705 (KWY62_00705) | - | 115150..116100 (-) | 951 | WP_014637311.1 | S66 peptidase family protein | - |
| KWY62_RS00710 (KWY62_00710) | comYA | 116186..117136 (+) | 951 | WP_105140681.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| KWY62_RS00715 (KWY62_00715) | comYB | 117048..118085 (+) | 1038 | WP_238492613.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| KWY62_RS00720 (KWY62_00720) | comYC | 118087..118368 (+) | 282 | WP_024395447.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| KWY62_RS00725 (KWY62_00725) | comGD | 118349..118756 (+) | 408 | WP_024395446.1 | competence type IV pilus minor pilin ComGD | - |
| KWY62_RS00730 (KWY62_00730) | comYE | 118728..119021 (+) | 294 | WP_002936548.1 | competence type IV pilus minor pilin ComGE | Machinery gene |
| KWY62_RS00735 (KWY62_00735) | comGF/cglF | 119008..119442 (+) | 435 | WP_024395445.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| KWY62_RS00740 (KWY62_00740) | comGG | 119420..119830 (+) | 411 | WP_024395444.1 | competence type IV pilus minor pilin ComGG | - |
| KWY62_RS00745 (KWY62_00745) | comYH | 119887..120840 (+) | 954 | WP_044776365.1 | class I SAM-dependent methyltransferase | Machinery gene |
| KWY62_RS00750 (KWY62_00750) | - | 120890..122077 (+) | 1188 | WP_014637319.1 | acetate kinase | - |
| KWY62_RS00755 (KWY62_00755) | - | 122338..122889 (+) | 552 | WP_014637320.1 | folate family ECF transporter S component | - |
| KWY62_RS00760 (KWY62_00760) | - | 122945..124201 (+) | 1257 | WP_024401511.1 | folylpolyglutamate synthase/dihydrofolate synthase family protein | - |
| KWY62_RS00765 (KWY62_00765) | pepA | 124246..125307 (-) | 1062 | WP_024409100.1 | glutamyl aminopeptidase | - |
| KWY62_RS00770 (KWY62_00770) | - | 125454..125738 (+) | 285 | WP_044769538.1 | DUF4651 domain-containing protein | - |
Sequence
Protein
Download Length: 317 a.a. Molecular weight: 35688.73 Da Isoelectric Point: 4.4003
>NTDB_id=588141 KWY62_RS00745 WP_044776365.1 119887..120840(+) (comYH) [Streptococcus suis strain ID41570]
MNFEKIEQAYDLLLENVQTIQNQLGTNIYDAMIEQNAAYVAGQHETDLVVNNNQTLKQLDLTKEEWRRAYQFLLIKANQT
EPMQYNHQFTPDSIGFILSFLVDQLVPTQKVTVLEIGSGTGNLAQTILNASQKELDYLGIEVDDLLIDLSASIADVMQAD
ISFAQGDAVRPQILKESQVILGDLPIGYYPDDQIASRYQVASPNEHTYAHHLLMEQSLKYLEKDGFAILLAPNDLLTSPQ
SDLLKGWLQEQANIVAMIALPPNLFGKAAMAKSIFVLQKKAARSLTPFVYPLQSLQEPEAIQKFMLNFKNWKQENAI
MNFEKIEQAYDLLLENVQTIQNQLGTNIYDAMIEQNAAYVAGQHETDLVVNNNQTLKQLDLTKEEWRRAYQFLLIKANQT
EPMQYNHQFTPDSIGFILSFLVDQLVPTQKVTVLEIGSGTGNLAQTILNASQKELDYLGIEVDDLLIDLSASIADVMQAD
ISFAQGDAVRPQILKESQVILGDLPIGYYPDDQIASRYQVASPNEHTYAHHLLMEQSLKYLEKDGFAILLAPNDLLTSPQ
SDLLKGWLQEQANIVAMIALPPNLFGKAAMAKSIFVLQKKAARSLTPFVYPLQSLQEPEAIQKFMLNFKNWKQENAI
Nucleotide
Download Length: 954 bp
>NTDB_id=588141 KWY62_RS00745 WP_044776365.1 119887..120840(+) (comYH) [Streptococcus suis strain ID41570]
ATGAATTTTGAAAAGATCGAACAGGCTTACGACCTGCTATTAGAAAACGTACAGACTATCCAAAACCAGCTAGGTACCAA
TATCTATGATGCCATGATTGAGCAAAATGCTGCTTACGTAGCTGGTCAGCATGAGACGGACCTTGTTGTCAATAACAATC
AGACCTTGAAACAACTAGATTTAACCAAGGAAGAATGGCGTCGTGCCTACCAATTCCTGCTCATCAAGGCCAATCAGACT
GAACCCATGCAGTATAATCACCAGTTCACACCAGACTCTATCGGCTTTATCCTATCTTTCCTAGTAGACCAATTGGTGCC
GACTCAAAAGGTGACGGTTCTGGAAATTGGTTCGGGGACAGGCAATCTAGCTCAGACCATTCTCAACGCCAGCCAGAAAG
AATTGGATTACTTGGGGATCGAAGTGGACGACCTCTTGATTGATTTGTCGGCAAGTATTGCGGATGTCATGCAGGCAGAT
ATTTCTTTTGCTCAGGGAGATGCGGTACGTCCGCAGATTTTGAAGGAAAGTCAAGTAATTTTGGGAGATTTGCCTATTGG
CTACTATCCAGATGACCAGATTGCTAGCCGTTATCAGGTCGCCAGCCCAAATGAACATACCTACGCCCATCATTTACTTA
TGGAACAATCCCTCAAATATCTGGAAAAAGATGGTTTTGCGATTTTGTTGGCTCCAAATGATTTATTGACTAGTCCGCAA
AGCGATTTGCTGAAAGGTTGGTTACAGGAGCAAGCCAATATTGTTGCCATGATTGCCCTGCCACCAAATCTCTTTGGGAA
GGCTGCTATGGCCAAGTCTATTTTTGTCTTGCAAAAGAAAGCTGCAAGATCGTTGACGCCGTTTGTTTATCCCTTACAAA
GTCTTCAAGAACCAGAAGCTATTCAGAAGTTCATGCTCAATTTCAAAAATTGGAAGCAAGAGAATGCAATTTAA
ATGAATTTTGAAAAGATCGAACAGGCTTACGACCTGCTATTAGAAAACGTACAGACTATCCAAAACCAGCTAGGTACCAA
TATCTATGATGCCATGATTGAGCAAAATGCTGCTTACGTAGCTGGTCAGCATGAGACGGACCTTGTTGTCAATAACAATC
AGACCTTGAAACAACTAGATTTAACCAAGGAAGAATGGCGTCGTGCCTACCAATTCCTGCTCATCAAGGCCAATCAGACT
GAACCCATGCAGTATAATCACCAGTTCACACCAGACTCTATCGGCTTTATCCTATCTTTCCTAGTAGACCAATTGGTGCC
GACTCAAAAGGTGACGGTTCTGGAAATTGGTTCGGGGACAGGCAATCTAGCTCAGACCATTCTCAACGCCAGCCAGAAAG
AATTGGATTACTTGGGGATCGAAGTGGACGACCTCTTGATTGATTTGTCGGCAAGTATTGCGGATGTCATGCAGGCAGAT
ATTTCTTTTGCTCAGGGAGATGCGGTACGTCCGCAGATTTTGAAGGAAAGTCAAGTAATTTTGGGAGATTTGCCTATTGG
CTACTATCCAGATGACCAGATTGCTAGCCGTTATCAGGTCGCCAGCCCAAATGAACATACCTACGCCCATCATTTACTTA
TGGAACAATCCCTCAAATATCTGGAAAAAGATGGTTTTGCGATTTTGTTGGCTCCAAATGATTTATTGACTAGTCCGCAA
AGCGATTTGCTGAAAGGTTGGTTACAGGAGCAAGCCAATATTGTTGCCATGATTGCCCTGCCACCAAATCTCTTTGGGAA
GGCTGCTATGGCCAAGTCTATTTTTGTCTTGCAAAAGAAAGCTGCAAGATCGTTGACGCCGTTTGTTTATCCCTTACAAA
GTCTTCAAGAACCAGAAGCTATTCAGAAGTTCATGCTCAATTTCAAAAATTGGAAGCAAGAGAATGCAATTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comYH | Streptococcus mutans UA140 |
60.443 |
99.685 |
0.603 |
| comYH | Streptococcus mutans UA159 |
60.127 |
99.685 |
0.599 |