Detailed information NTG0058763

Bioinformatically predicted

Overview

• Name: lytF
• Type: Regulator
• Locus tag: SA27298_RS00260
• Genome accession: NZ_AP018548
• Coordinates: 39767..41701 (-)
• Length: 644 a.a.
• NCBI ID: WP_003032068.1
• Uniprot ID: -
• Organism: Streptococcus anginosus strain CCUG 27928
• Function: cell lysis (predicted from homology) Cell lysis

Genomic Context

Location: 34767..46701

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SA27298_RS00240 (SA27298_0049)	purM	36348..37367 (+)	1020	WP_003032034.1	phosphoribosylformylglycinamidine cyclo-ligase	-
SA27298_RS00245 (SA27298_0050)	purN	37367..37921 (+)	555	WP_003032059.1	phosphoribosylglycinamide formyltransferase	-
SA27298_RS00250 (SA27298_0051)	-	37979..38146 (+)	168	WP_003032041.1	hypothetical protein	-
SA27298_RS00255 (SA27298_0052)	purH	38161..39708 (+)	1548	WP_003032070.1	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	-
SA27298_RS00260 (SA27298_0053)	lytF	39767..41701 (-)	1935	WP_003032068.1	GBS Bsp-like repeat-containing protein	Regulator
SA27298_RS00265 (SA27298_0054)	purD	41898..43163 (+)	1266	WP_003032080.1	phosphoribosylamine--glycine ligase	-
SA27298_RS00270 (SA27298_0055)	-	43153..43587 (+)	435	WP_003032062.1	DUF523 domain-containing protein	-
SA27298_RS00275 (SA27298_0056)	purE	43825..44313 (+)	489	WP_003032076.1	5-(carboxyamino)imidazole ribonucleotide mutase	-
SA27298_RS00280 (SA27298_0057)	purK	44300..45391 (+)	1092	WP_003032036.1	5-(carboxyamino)imidazole ribonucleotide synthase	-
SA27298_RS00285 (SA27298_0058)	-	45392..46342 (+)	951	WP_003032049.1	2-dehydropantoate 2-reductase N-terminal domain-containing protein	-
SA27298_RS00290 (SA27298_0059)	-	46352..46579 (+)	228	WP_003032061.1	hypothetical protein	-

Sequence

Protein

• Length: 644 a.a.
• Molecular weight: 71147.85 Da
• Isoelectric Point: 7.7438

>NTDB_id=58763 SA27298_RS00260 WP_003032068.1 39767..41701(-) (lytF) [Streptococcus anginosus strain CCUG 27928]
MKKYNQLFLLSSAMLSVFSAQLTAQAAETNNTQKSSNPATLASDITVNVSGNTASINYTRLQTQVPYTIYHAVWSDENGQ
DDIKWYSAPQTPTTAVDLRQHTGYGTFHVHTYININGKMVGLNGTTFKVEKPASGTVSTTVLGKTAQISFTRNKDQTNAN
ILHAVWSDEKGQDDIKWYTAGQDTTEIDLSNHKGYGVYHVHTYESKNGKMIGLNGTTFNLEKPNPTIQTSFPEPGIMDIQ
IKNVPETIYKLTVPAWSDRNGQDDLQWYAATKNPDGSYNVRVELKKHNYDTGTYHIHLYGESYVKPEFTGLAGITAQVDA
DKLPSEEEQKPFFSVENINQEQGTYTVKVSETSESKPIQSVRVPIWSTSNQSNIKWYAATNHGDGTFTAAFDIRNHQVLS
GTYTNHIYVKYKDGSEHSYVTDSVAMSAEKIKTKVSVAKRSTYLYEVTVTDAYGDGKISLPTWSEVNGQDDIQWYTATKA
GNGIYKFTVDTQKHTGSGLFHTHVYRNLNGQIIGLTGTSYQVEKPAVSFQPNYAAATTYPKGQCTWGAKALAPWAGNYWG
NGGDWTASARRAGFKTGTTPQVGAIICWTDGGYGHVGVVTHVASNTRIQIQEANYAGKQYIGNFRGWFNPHAAGQGAVSY
IYPK

Nucleotide

• Length: 1935 bp

>NTDB_id=58763 SA27298_RS00260 WP_003032068.1 39767..41701(-) (lytF) [Streptococcus anginosus strain CCUG 27928]
ATGAAAAAATACAATCAATTATTTTTACTATCCAGCGCTATGTTGAGCGTTTTTTCAGCTCAACTAACAGCTCAAGCCGC
GGAAACAAATAATACTCAAAAAAGCTCAAATCCAGCAACTCTCGCTAGCGATATTACTGTCAATGTTTCAGGAAACACTG
CTTCTATTAACTATACACGTTTGCAAACGCAAGTTCCTTACACCATTTACCATGCTGTTTGGTCTGATGAAAATGGGCAA
GATGACATTAAGTGGTATTCCGCGCCCCAAACACCAACTACAGCTGTTGATTTGCGTCAGCACACTGGTTATGGAACCTT
TCACGTCCACACCTATATCAATATCAATGGGAAAATGGTTGGTTTAAACGGAACGACTTTCAAAGTAGAAAAACCAGCTA
GCGGCACGGTTTCTACAACCGTTTTAGGAAAGACTGCTCAAATATCCTTTACTCGAAACAAAGATCAAACAAATGCCAAT
ATTTTACACGCTGTTTGGTCTGACGAAAAAGGACAAGATGATATCAAGTGGTATACAGCAGGGCAAGACACAACAGAAAT
TGACTTATCCAATCATAAAGGATACGGTGTTTACCATGTTCATACTTATGAAAGTAAAAACGGAAAGATGATTGGATTAA
ATGGCACCACTTTTAACCTTGAAAAACCAAATCCTACTATTCAGACTAGCTTTCCTGAGCCTGGTATCATGGATATTCAG
ATCAAAAATGTTCCTGAAACAATCTACAAACTAACTGTTCCGGCTTGGTCTGACCGCAACGGACAGGATGATCTTCAATG
GTATGCAGCTACTAAAAATCCTGATGGAAGCTACAATGTTAGAGTTGAGCTAAAAAAACACAACTATGACACAGGAACTT
ATCACATTCATCTTTACGGAGAAAGCTATGTCAAACCAGAGTTTACTGGCTTAGCTGGAATCACTGCCCAAGTTGATGCT
GATAAATTGCCTTCTGAAGAAGAGCAAAAACCATTCTTCTCTGTTGAAAATATCAATCAAGAACAAGGGACTTATACCGT
CAAAGTTAGTGAAACTTCAGAGTCCAAGCCGATTCAATCCGTCCGAGTACCTATTTGGAGCACGAGCAATCAAAGCAATA
TTAAGTGGTATGCAGCCACTAATCACGGTGACGGAACATTTACGGCAGCATTTGATATTCGCAATCATCAAGTTTTGTCT
GGAACATACACCAATCATATTTATGTGAAATATAAAGACGGTAGCGAGCATAGTTACGTAACGGATTCGGTTGCTATGTC
CGCAGAAAAAATTAAAACCAAAGTATCTGTCGCTAAACGCTCAACTTATCTTTATGAGGTGACGGTGACAGATGCTTACG
GCGATGGCAAGATTAGCCTACCGACTTGGTCTGAAGTCAACGGCCAAGATGATATTCAGTGGTACACCGCTACTAAAGCT
GGAAATGGAATTTACAAATTCACAGTTGATACGCAAAAACACACTGGCAGTGGCCTTTTCCATACACATGTTTACCGCAA
TCTCAACGGTCAAATAATTGGACTAACAGGTACAAGCTATCAGGTAGAGAAGCCTGCTGTCTCTTTCCAACCAAATTATG
CCGCAGCAACGACTTATCCAAAAGGTCAATGCACTTGGGGCGCCAAAGCTCTTGCGCCTTGGGCTGGCAATTATTGGGGC
AACGGTGGTGACTGGACTGCTAGTGCCAGACGAGCTGGTTTTAAAACCGGTACAACTCCACAAGTAGGGGCTATTATTTG
TTGGACAGACGGTGGTTACGGTCACGTTGGAGTTGTTACTCACGTTGCCTCAAACACACGCATTCAGATTCAAGAGGCCA
ACTACGCTGGAAAACAGTATATTGGCAACTTCCGCGGCTGGTTCAATCCTCATGCAGCTGGACAAGGAGCAGTTAGTTAC
ATTTATCCAAAATAA

Domains

Predicted by InterProScan.

• GBS Bsp-like repeat (GBS_Bsp-like) (151-218)

• GBS Bsp-like repeat (GBS_Bsp-like) (437-511)

• GBS Bsp-like repeat (GBS_Bsp-like) (335-419)

• GBS Bsp-like repeat (GBS_Bsp-like) (232-302)

• GBS Bsp-like repeat (GBS_Bsp-like) (68-126)

• CHAP domain (CHAP) (537-614)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
lytF	Streptococcus gordonii strain NCTC7865	45.977	81.056	0.373
lytF	Streptococcus gordonii str. Challis substr. CH1	44.961	80.124	0.36