Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   KVH38_RS18235 Genome accession   NZ_CP078509
Coordinates   3888073..3888480 (+) Length   135 a.a.
NCBI ID   WP_003282729.1    Uniprot ID   -
Organism   Stutzerimonas stutzeri strain S116     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 3883073..3893480
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KVH38_RS18205 (KVH38_18205) - 3883242..3884258 (-) 1017 WP_011914964.1 aspartate carbamoyltransferase catalytic subunit -
  KVH38_RS18210 (KVH38_18210) pyrR 3884312..3884827 (-) 516 WP_125855920.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  KVH38_RS18215 (KVH38_18215) ruvX 3884845..3885273 (-) 429 WP_125855919.1 Holliday junction resolvase RuvX -
  KVH38_RS18220 (KVH38_18220) - 3885270..3885839 (-) 570 WP_011914961.1 YqgE/AlgH family protein -
  KVH38_RS18225 (KVH38_18225) - 3885905..3886798 (-) 894 WP_125855918.1 energy transducer TonB -
  KVH38_RS18230 (KVH38_18230) gshB 3886886..3887836 (-) 951 WP_014597995.1 glutathione synthase -
  KVH38_RS18235 (KVH38_18235) pilG 3888073..3888480 (+) 408 WP_003282729.1 twitching motility response regulator PilG Regulator
  KVH38_RS18240 (KVH38_18240) pilH 3888525..3888890 (+) 366 WP_003297216.1 twitching motility response regulator PilH -
  KVH38_RS18245 (KVH38_18245) - 3888932..3889468 (+) 537 WP_020305669.1 chemotaxis protein CheW -
  KVH38_RS18250 (KVH38_18250) - 3889547..3891595 (+) 2049 WP_020305670.1 methyl-accepting chemotaxis protein -
  KVH38_RS18255 (KVH38_18255) - 3891656..3892522 (+) 867 WP_011914955.1 CheR family methyltransferase -

Sequence

Protein


Download         Length: 135 a.a.        Molecular weight: 14826.22 Da        Isoelectric Point: 7.2439

>NTDB_id=587561 KVH38_RS18235 WP_003282729.1 3888073..3888480(+) (pilG) [Stutzerimonas stutzeri strain S116]
MEQHSEGLKVMVIDDSKTIRRTAETLLKKVGCDVITAVDGFDALAKIADTHPRIIFVDIMMPRLDGYQTCALIKNNSSFK
STPVIMLSSKDGLFDKAKGRIVGSDQYLTKPFSKEELLGAIKAHVPDFAPVEQAS

Nucleotide


Download         Length: 408 bp        

>NTDB_id=587561 KVH38_RS18235 WP_003282729.1 3888073..3888480(+) (pilG) [Stutzerimonas stutzeri strain S116]
ATGGAACAGCACTCCGAGGGCTTGAAGGTCATGGTGATCGACGATTCGAAAACGATTCGTCGCACTGCTGAAACCCTGCT
GAAGAAAGTAGGTTGCGATGTCATCACCGCAGTGGACGGTTTCGATGCCCTCGCCAAGATTGCGGATACTCATCCCCGCA
TCATCTTTGTCGATATTATGATGCCCAGGCTGGACGGTTATCAGACCTGCGCGTTGATCAAGAACAACAGTTCCTTCAAG
TCGACGCCAGTGATCATGCTGTCTTCCAAAGACGGCCTGTTCGACAAGGCGAAGGGGCGCATTGTCGGCTCCGATCAATA
CCTCACCAAACCGTTCAGCAAAGAAGAGCTGCTCGGTGCAATCAAGGCTCATGTCCCTGATTTCGCGCCGGTGGAGCAAG
CGTCCTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

76

92.593

0.704
  vicR Streptococcus mutans UA159

42.857

93.333

0.4