Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | KVY09_RS06310 | Genome accession | NZ_CP078159 |
| Coordinates | 1266280..1267254 (+) | Length | 324 a.a. |
| NCBI ID | WP_070442811.1 | Uniprot ID | - |
| Organism | Staphylococcus haemolyticus strain NY5 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1261280..1272254
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KVY09_RS06275 (KVY09_06275) | rpmG | 1261711..1261860 (+) | 150 | WP_011275661.1 | 50S ribosomal protein L33 | - |
| KVY09_RS06280 (KVY09_06280) | - | 1262097..1262633 (+) | 537 | WP_070442800.1 | 5-formyltetrahydrofolate cyclo-ligase | - |
| KVY09_RS06285 (KVY09_06285) | - | 1262649..1264106 (+) | 1458 | WP_070442803.1 | rhomboid family intramembrane serine protease | - |
| KVY09_RS06290 (KVY09_06290) | - | 1264090..1264293 (+) | 204 | WP_037550632.1 | YqgQ family protein | - |
| KVY09_RS06295 (KVY09_06295) | - | 1264290..1265276 (+) | 987 | WP_011275665.1 | ROK family glucokinase | - |
| KVY09_RS06300 (KVY09_06300) | - | 1265276..1265599 (+) | 324 | WP_011275666.1 | MTH1187 family thiamine-binding protein | - |
| KVY09_RS06305 (KVY09_06305) | - | 1265601..1266227 (+) | 627 | WP_070442806.1 | MBL fold metallo-hydrolase | - |
| KVY09_RS06310 (KVY09_06310) | comGA | 1266280..1267254 (+) | 975 | WP_070442811.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| KVY09_RS06315 (KVY09_06315) | comGB | 1267226..1268290 (+) | 1065 | WP_070442814.1 | competence type IV pilus assembly protein ComGB | - |
| KVY09_RS06320 (KVY09_06320) | comGC | 1268304..1268624 (+) | 321 | WP_218449186.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| KVY09_RS06325 (KVY09_06325) | - | 1268689..1269057 (+) | 369 | WP_256323818.1 | hypothetical protein | - |
| KVY09_RS13025 | - | 1269495..1269746 (+) | 252 | WP_240556425.1 | hypothetical protein | - |
| KVY09_RS06335 (KVY09_06335) | - | 1269906..1270424 (+) | 519 | WP_070442826.1 | shikimate kinase | - |
| KVY09_RS06340 (KVY09_06340) | gcvT | 1270614..1271705 (+) | 1092 | WP_070442828.1 | glycine cleavage system aminomethyltransferase GcvT | - |
Sequence
Protein
Download Length: 324 a.a. Molecular weight: 37177.17 Da Isoelectric Point: 8.4429
>NTDB_id=587417 KVY09_RS06310 WP_070442811.1 1266280..1267254(+) (comGA) [Staphylococcus haemolyticus strain NY5]
MKLLFREIVNKAISKNASDIHFIPSVDEVHIKFRINDYLELYEIFNLDVYQKLLVFMKFKSGLDVSSQQSAQSGRYTYQS
KSTFYLRISTLPLSLGVESCVIRIIPQYFQAKKEYKEFNDFKHLVNKKQGLILLTGPTGSGKSTLMYQMVLHAYKELNLN
VITIENPVEQLLKGITQISINKKAGIDYISSFKAILRCDPDIILIGEIRDAEVAKCVIQASLSGHLVLSTMHSTNCRGAL
LRLLEMGISIQELTQSINIISNQRLIMTTQNERRLICETIDKKQIQYFFEHEQTMPHNFNNLEQQLNLLSKEGTICEDTA
SKYF
MKLLFREIVNKAISKNASDIHFIPSVDEVHIKFRINDYLELYEIFNLDVYQKLLVFMKFKSGLDVSSQQSAQSGRYTYQS
KSTFYLRISTLPLSLGVESCVIRIIPQYFQAKKEYKEFNDFKHLVNKKQGLILLTGPTGSGKSTLMYQMVLHAYKELNLN
VITIENPVEQLLKGITQISINKKAGIDYISSFKAILRCDPDIILIGEIRDAEVAKCVIQASLSGHLVLSTMHSTNCRGAL
LRLLEMGISIQELTQSINIISNQRLIMTTQNERRLICETIDKKQIQYFFEHEQTMPHNFNNLEQQLNLLSKEGTICEDTA
SKYF
Nucleotide
Download Length: 975 bp
>NTDB_id=587417 KVY09_RS06310 WP_070442811.1 1266280..1267254(+) (comGA) [Staphylococcus haemolyticus strain NY5]
TTGAAACTATTATTCAGAGAGATAGTTAATAAAGCTATTTCAAAAAATGCGAGCGACATACATTTTATCCCTTCAGTTGA
TGAAGTTCATATTAAATTTAGAATTAATGATTATCTTGAACTTTATGAAATATTCAACTTAGATGTATATCAAAAATTAT
TAGTATTTATGAAATTCAAATCAGGTTTGGATGTTTCATCTCAACAATCCGCTCAAAGTGGTCGTTATACTTATCAATCT
AAATCTACTTTTTATTTACGGATTTCAACATTACCTTTGTCTTTAGGTGTAGAAAGTTGTGTAATTAGGATAATTCCTCA
ATATTTTCAAGCAAAAAAAGAATATAAAGAATTTAACGATTTTAAACACTTAGTAAATAAAAAACAGGGATTAATTCTAT
TAACTGGACCCACTGGATCCGGAAAAAGTACTCTGATGTATCAAATGGTTCTACATGCATATAAAGAATTAAATCTTAAT
GTTATCACTATCGAAAACCCAGTTGAGCAATTACTAAAAGGCATTACCCAAATATCAATAAATAAAAAGGCAGGTATAGA
CTACATAAGTTCATTTAAAGCTATATTAAGATGTGATCCTGATATTATTTTAATAGGTGAAATAAGAGACGCAGAAGTTG
CTAAATGTGTTATTCAAGCTAGTTTGAGTGGACACCTTGTATTATCAACCATGCATTCTACTAATTGTAGAGGTGCATTA
CTTCGATTACTTGAGATGGGAATTTCAATTCAAGAATTAACTCAATCTATCAATATCATTTCTAATCAAAGATTAATAAT
GACTACTCAGAATGAGCGTCGCTTAATTTGTGAAACAATAGATAAAAAGCAGATACAATATTTCTTCGAGCATGAACAAA
CAATGCCACATAATTTTAATAATTTAGAACAGCAATTAAATTTATTATCTAAAGAAGGAACAATTTGTGAAGATACTGCA
AGTAAATATTTTTAA
TTGAAACTATTATTCAGAGAGATAGTTAATAAAGCTATTTCAAAAAATGCGAGCGACATACATTTTATCCCTTCAGTTGA
TGAAGTTCATATTAAATTTAGAATTAATGATTATCTTGAACTTTATGAAATATTCAACTTAGATGTATATCAAAAATTAT
TAGTATTTATGAAATTCAAATCAGGTTTGGATGTTTCATCTCAACAATCCGCTCAAAGTGGTCGTTATACTTATCAATCT
AAATCTACTTTTTATTTACGGATTTCAACATTACCTTTGTCTTTAGGTGTAGAAAGTTGTGTAATTAGGATAATTCCTCA
ATATTTTCAAGCAAAAAAAGAATATAAAGAATTTAACGATTTTAAACACTTAGTAAATAAAAAACAGGGATTAATTCTAT
TAACTGGACCCACTGGATCCGGAAAAAGTACTCTGATGTATCAAATGGTTCTACATGCATATAAAGAATTAAATCTTAAT
GTTATCACTATCGAAAACCCAGTTGAGCAATTACTAAAAGGCATTACCCAAATATCAATAAATAAAAAGGCAGGTATAGA
CTACATAAGTTCATTTAAAGCTATATTAAGATGTGATCCTGATATTATTTTAATAGGTGAAATAAGAGACGCAGAAGTTG
CTAAATGTGTTATTCAAGCTAGTTTGAGTGGACACCTTGTATTATCAACCATGCATTCTACTAATTGTAGAGGTGCATTA
CTTCGATTACTTGAGATGGGAATTTCAATTCAAGAATTAACTCAATCTATCAATATCATTTCTAATCAAAGATTAATAAT
GACTACTCAGAATGAGCGTCGCTTAATTTGTGAAACAATAGATAAAAAGCAGATACAATATTTCTTCGAGCATGAACAAA
CAATGCCACATAATTTTAATAATTTAGAACAGCAATTAAATTTATTATCTAAAGAAGGAACAATTTGTGAAGATACTGCA
AGTAAATATTTTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Staphylococcus aureus MW2 |
65.635 |
99.691 |
0.654 |
| comGA | Staphylococcus aureus N315 |
65.635 |
99.691 |
0.654 |