Detailed information    

insolico Bioinformatically predicted

Overview

Name   vraS   Type   Regulator
Locus tag   KVY09_RS04685 Genome accession   NZ_CP078159
Coordinates   952105..953151 (+) Length   348 a.a.
NCBI ID   WP_053025471.1    Uniprot ID   -
Organism   Staphylococcus haemolyticus strain NY5     
Function   repress expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 947105..958151
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KVY09_RS04660 (KVY09_04660) map 947981..948733 (+) 753 WP_053025476.1 type I methionyl aminopeptidase -
  KVY09_RS13005 - 948846..948971 (-) 126 WP_256262273.1 hypothetical protein -
  KVY09_RS04665 (KVY09_04665) - 948984..949571 (-) 588 WP_256262274.1 SDR family NAD(P)-dependent oxidoreductase -
  KVY09_RS13010 - 949568..949705 (-) 138 WP_256262275.1 SDR family NAD(P)-dependent oxidoreductase -
  KVY09_RS04670 (KVY09_04670) - 949777..950782 (-) 1006 Protein_934 HoxN/HupN/NixA family nickel/cobalt transporter -
  KVY09_RS04675 (KVY09_04675) - 950996..951382 (+) 387 WP_053025474.1 hypothetical protein -
  KVY09_RS04680 (KVY09_04680) liaF 951407..952108 (+) 702 WP_053025472.1 cell wall-active antibiotics response protein LiaF -
  KVY09_RS04685 (KVY09_04685) vraS 952105..953151 (+) 1047 WP_053025471.1 sensor histidine kinase Regulator
  KVY09_RS04690 (KVY09_04690) vraR 953141..953770 (+) 630 WP_037551137.1 two-component system response regulator VraR Regulator
  KVY09_RS04695 (KVY09_04695) - 953833..955044 (-) 1212 WP_053025467.1 YihY/virulence factor BrkB family protein -
  KVY09_RS04700 (KVY09_04700) - 955243..955527 (-) 285 WP_053025464.1 YtxH domain-containing protein -
  KVY09_RS04705 (KVY09_04705) - 955512..955997 (-) 486 WP_070441564.1 low molecular weight protein-tyrosine-phosphatase -
  KVY09_RS04710 (KVY09_04710) - 956139..956347 (+) 209 Protein_942 DUF1128 domain-containing protein -
  KVY09_RS04715 (KVY09_04715) - 956361..957608 (+) 1248 WP_070441567.1 aminopeptidase -

Sequence

Protein


Download         Length: 348 a.a.        Molecular weight: 40180.57 Da        Isoelectric Point: 5.8508

>NTDB_id=587408 KVY09_RS04685 WP_053025471.1 952105..953151(+) (vraS) [Staphylococcus haemolyticus strain NY5]
MNHYLRAIGSMLILVYSMLTAFLFIDKVFVNIIYFQGMFYTQIFGIPVFLFLNLVIILLCIIVGSILAYKINQQNQWIKS
QIEHAIEGETVGINDQNIELYNETIDLYQTLVPLNQELHRLRMKTQNLTNENYNMNDVKVKKIIEDERQRLARELHDSVS
QQLFAASMMLSAIKETKLEAPLDQQIPVLEKMVQESQLEMRALLLHLRPLGLKDKSLGEGIKDLVIDLQKKVPMKVIHDI
QDFKVPKGIEDHLFRITQEAISNTLRHSNGTKVTVELFNQQDYLLLRIQDNGKGFNVDEKLEQSYGLKNMRERALEIGAT
FHIVSLPDSGTRIEVKAPLNREDDNNDD

Nucleotide


Download         Length: 1047 bp        

>NTDB_id=587408 KVY09_RS04685 WP_053025471.1 952105..953151(+) (vraS) [Staphylococcus haemolyticus strain NY5]
ATGAACCACTACTTAAGAGCTATCGGTTCAATGCTTATACTAGTTTATAGCATGTTAACCGCGTTCTTATTTATAGATAA
AGTATTTGTTAATATTATCTATTTCCAAGGTATGTTTTATACTCAAATTTTTGGGATACCTGTTTTTCTATTTTTAAATT
TAGTCATCATTTTACTTTGTATTATTGTAGGTTCAATTCTCGCATATAAAATTAATCAACAAAATCAGTGGATTAAGTCA
CAAATTGAACATGCCATTGAAGGAGAAACAGTAGGTATTAATGATCAAAATATTGAGCTTTATAACGAAACCATAGACCT
TTATCAAACATTAGTTCCGCTAAATCAAGAGTTGCACCGTTTACGAATGAAAACGCAAAACTTAACTAATGAAAATTACA
ATATGAATGATGTCAAAGTTAAGAAAATCATTGAGGATGAACGACAGAGATTAGCTCGCGAGTTACACGACTCTGTAAGT
CAACAACTTTTTGCAGCAAGTATGATGTTATCTGCAATAAAAGAAACAAAGTTAGAGGCACCGCTTGATCAACAAATACC
AGTTTTAGAGAAAATGGTTCAGGAGTCTCAACTTGAAATGCGCGCATTATTACTTCATTTAAGACCTTTAGGTCTAAAAG
ATAAATCACTAGGTGAAGGTATCAAAGATTTAGTTATTGATTTGCAAAAGAAAGTGCCTATGAAAGTCATACACGATATT
CAAGATTTCAAGGTCCCTAAAGGTATAGAAGATCATTTATTTAGAATTACACAAGAGGCTATATCAAATACGTTAAGACA
TTCAAATGGAACTAAAGTCACAGTGGAATTATTTAACCAACAAGATTATCTATTACTTCGAATTCAAGATAATGGTAAAG
GATTCAATGTTGACGAGAAATTAGAGCAAAGTTATGGATTAAAAAATATGAGAGAACGCGCATTAGAAATTGGTGCGACA
TTCCATATTGTATCGTTACCGGATTCTGGAACGAGAATAGAAGTTAAAGCACCGTTAAATAGGGAGGATGATAATAATGA
CGATTAA

Domains

Predicted by InterproScan.

Histidine kinase (HisKA_3)

(147-210)

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(249-340)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vraS Staphylococcus aureus N315

91.931

99.713

0.917