Detailed information
Bioinformatically predicted
Overview
| Name | comFC | Type | Machinery gene |
| Locus tag | K750_RS06935 | Genome accession | NC_021217 |
| Coordinates | 1431309..1431884 (+) | Length | 191 a.a. |
| NCBI ID | WP_015643599.1 | Uniprot ID | A0AB33Z967 |
| Organism | Helicobacter pylori UM037 | ||
| Function | ssDNA transport into the cell (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1426309..1436884
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| K750_RS06910 (K750_00875) | uvrD | 1427000..1429045 (+) | 2046 | WP_015643605.1 | DNA helicase UvrD | - |
| K750_RS06915 (K750_00870) | flgA | 1429042..1429698 (+) | 657 | WP_015643604.1 | flagellar basal body P-ring formation chaperone FlgA | - |
| K750_RS06920 (K750_09015) | - | 1429708..1430271 (+) | 564 | WP_020948458.1 | UbiX family flavin prenyltransferase | - |
| K750_RS06925 (K750_00850) | coaD | 1430271..1430744 (+) | 474 | WP_001169241.1 | pantetheine-phosphate adenylyltransferase | - |
| K750_RS06930 (K750_00845) | tmk | 1430746..1431321 (+) | 576 | WP_015643600.1 | dTMP kinase | - |
| K750_RS06935 (K750_00840) | comFC | 1431309..1431884 (+) | 576 | WP_015643599.1 | ComF family protein | Machinery gene |
| K750_RS06940 (K750_00835) | - | 1431918..1433954 (+) | 2037 | WP_015643598.1 | N-6 DNA methylase | - |
| K750_RS06945 (K750_00830) | - | 1433951..1435159 (+) | 1209 | WP_015643597.1 | restriction endonuclease subunit S | - |
Sequence
Protein
Download Length: 191 a.a. Molecular weight: 21316.90 Da Isoelectric Point: 8.6728
>NTDB_id=58720 K750_RS06935 WP_015643599.1 1431309..1431884(+) (comFC) [Helicobacter pylori UM037]
MRCLTCLKLSFKPLCPNCLNDLPLSLKVRVLEGVSVYSFYAYSEIEELIKSKYALIGSRILPLLSQKAGAEFVKILQEQG
LDTPLYGIAIDDKIKSFYSHSAALLKGFCQGNLKPTYGRLRAINAVSYAGKSLEFRANNPRNFTFKGDENLDYFLLDDII
TTGTTLKEALKYLKALNIKVHFAIALCSADE
MRCLTCLKLSFKPLCPNCLNDLPLSLKVRVLEGVSVYSFYAYSEIEELIKSKYALIGSRILPLLSQKAGAEFVKILQEQG
LDTPLYGIAIDDKIKSFYSHSAALLKGFCQGNLKPTYGRLRAINAVSYAGKSLEFRANNPRNFTFKGDENLDYFLLDDII
TTGTTLKEALKYLKALNIKVHFAIALCSADE
Nucleotide
Download Length: 576 bp
>NTDB_id=58720 K750_RS06935 WP_015643599.1 1431309..1431884(+) (comFC) [Helicobacter pylori UM037]
ATGCGTTGTTTAACTTGTTTGAAGCTTTCTTTTAAGCCTCTTTGCCCAAATTGCCTAAACGATTTGCCCTTAAGCTTAAA
AGTAAGGGTTTTAGAGGGCGTGAGCGTGTATAGTTTTTACGCTTATAGCGAAATAGAAGAACTCATTAAAAGCAAATACG
CGCTGATTGGCTCTCGCATTTTGCCCTTGCTTTCTCAAAAAGCCGGTGCGGAATTTGTGAAAATCTTACAAGAACAGGGC
TTGGATACCCCCCTTTATGGCATCGCCATTGACGATAAAATCAAATCCTTTTACTCGCATTCAGCCGCACTTTTAAAAGG
CTTTTGTCAAGGCAATTTAAAACCCACTTACGGGCGTTTAAGAGCTATTAATGCTGTTTCGTATGCCGGGAAAAGCCTGG
AATTTCGCGCCAACAACCCACGGAATTTCACCTTCAAAGGCGATGAAAACTTAGATTATTTTTTATTAGATGATATTATC
ACCACCGGCACCACCCTAAAAGAAGCCCTAAAATACCTTAAAGCTCTAAACATAAAAGTGCACTTTGCGATCGCACTTTG
CAGCGCGGATGAATGA
ATGCGTTGTTTAACTTGTTTGAAGCTTTCTTTTAAGCCTCTTTGCCCAAATTGCCTAAACGATTTGCCCTTAAGCTTAAA
AGTAAGGGTTTTAGAGGGCGTGAGCGTGTATAGTTTTTACGCTTATAGCGAAATAGAAGAACTCATTAAAAGCAAATACG
CGCTGATTGGCTCTCGCATTTTGCCCTTGCTTTCTCAAAAAGCCGGTGCGGAATTTGTGAAAATCTTACAAGAACAGGGC
TTGGATACCCCCCTTTATGGCATCGCCATTGACGATAAAATCAAATCCTTTTACTCGCATTCAGCCGCACTTTTAAAAGG
CTTTTGTCAAGGCAATTTAAAACCCACTTACGGGCGTTTAAGAGCTATTAATGCTGTTTCGTATGCCGGGAAAAGCCTGG
AATTTCGCGCCAACAACCCACGGAATTTCACCTTCAAAGGCGATGAAAACTTAGATTATTTTTTATTAGATGATATTATC
ACCACCGGCACCACCCTAAAAGAAGCCCTAAAATACCTTAAAGCTCTAAACATAAAAGTGCACTTTGCGATCGCACTTTG
CAGCGCGGATGAATGA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comFC | Helicobacter pylori 26695 |
97.382 |
100 |
0.974 |
| ctsW | Campylobacter jejuni subsp. jejuni 81-176 |
36.979 |
100 |
0.372 |