Detailed information NTG0586998

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: KWY96_RS10505
• Genome accession: NZ_CP078116
• Coordinates: 2023369..2024622 (+)
• Length: 417 a.a.
• NCBI ID: WP_003687004.1
• Uniprot ID: A0AB74EGQ8
• Organism: Neisseria gonorrhoeae strain 88G285
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2018369..2029622

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KWY96_RS10485 (KWY96_10485)	-	2019119..2020120 (+)	1002	WP_172762952.1	thiamine ABC transporter substrate-binding protein	-
KWY96_RS10490 (KWY96_10490)	-	2020214..2021062 (+)	849	WP_003687000.1	mechanosensitive ion channel family protein	-
KWY96_RS10495 (KWY96_10495)	-	2021089..2021571 (+)	483	WP_003694396.1	CinA family protein	-
KWY96_RS10500 (KWY96_10500)	msrAB	2021655..2023223 (-)	1569	WP_003696503.1	bifunctional peptide-methionine (S)-S-oxide reductase MsrA/peptide-methionine (R)-S-oxide reductase MsrB	-
KWY96_RS10505 (KWY96_10505)	pilA	2023369..2024622 (+)	1254	WP_003687004.1	signal recognition particle-docking protein FtsY	Machinery gene
KWY96_RS10510 (KWY96_10510)	-	2025204..2025968 (-)	765	Protein_2034	opacity family porin	-
KWY96_RS10515 (KWY96_10515)	-	2025896..2026060 (-)	165	WP_218422904.1	hypothetical protein	-
KWY96_RS10520 (KWY96_10520)	pilE	2026558..2026986 (-)	429	WP_218422905.1	pilin	Machinery gene
KWY96_RS10525 (KWY96_10525)	lpxC	2027092..2028015 (-)	924	WP_003687007.1	UDP-3-O-acyl-N-acetylglucosamine deacetylase	-
KWY96_RS11695	-	2028508..2028873 (-)	366	Protein_2038	pilin	-
KWY96_RS11700	-	2028913..2029314 (-)	402	Protein_2039	pilin	-

Sequence

Protein

• Length: 417 a.a.
• Molecular weight: 44389.74 Da
• Isoelectric Point: 4.8123

>NTDB_id=586998 KWY96_RS10505 WP_003687004.1 2023369..2024622(+) (pilA) [Neisseria gonorrhoeae strain 88G285]
MFSFFRRKKKQETPALEEAQVQETAAKVESEVAQIVGNIKEDVESLAESVKGRAESAVETVSGAVEQVKETVAEMPSEAG
EAAERVESAKEAVAETVGEAVGQVQEAVATTEEHKLGWAARLKQGLAKSRDKMAKSLAGVFGGGQIGEDLYEELETVLIT
GDMGMEATEYLMKDVRDRVSLKGLKDGNELRGALKEALYDLIKPLEKPLVLPETKEPFVIMLAGINGAGKTTSIGKLAKY
FQAQGKSVLLAAGDTFRAAAREQLQAWGGRNNVTVISQTTGDSAAVCFDAVQAAKARGIDIVLADTAGRLPTQLHLMEEI
KKVKRVLQKAIPGAPHEIIVVLDANIGQNAVNQVKAFDDALGLTGLIVTKLDGTAKGGILAALASDRPVPVRYIGVGEGI
DDLRPFDARAFVDALLD

Nucleotide

• Length: 1254 bp

>NTDB_id=586998 KWY96_RS10505 WP_003687004.1 2023369..2024622(+) (pilA) [Neisseria gonorrhoeae strain 88G285]
ATGTTCAGCTTCTTCCGTCGCAAGAAAAAACAGGAAACGCCGGCTCTCGAGGAGGCCCAAGTTCAGGAAACCGCAGCAAA
AGTAGAATCTGAAGTTGCTCAAATAGTTGGAAATATTAAAGAAGATGTCGAATCTTTAGCAGAAAGCGTCAAAGGGCGGG
CCGAATCTGCCGTTGAAACCGTCAGCGGTGCGGTTGAACAGGTAAAGGAAACCGTTGCCGAGATGCCGTCTGAAGCAGGG
GAAGCGGCGGAACGCGTTGAATCCGCAAAAGAAGCTGTTGCCGAAACCGTCGGCGAGGCTGTCGGGCAAGTTCAAGAAGC
CGTTGCGACAACTGAAGAACACAAGCTCGGTTGGGCTGCGCGTTTGAAACAAGGCTTGGCCAAATCACGCGACAAAATGG
CGAAATCGCTGGCCGGCGTGTTCGGCGGCGGACAAATCGGCGAGGATTTGTACGAAGAGCTGGAAACCGTGCTGATTACC
GGCGATATGGGCATGGAGGCCACCGAATACCTGATGAAAGACGTGCGCGACCGCGTCAGCCTCAAAGGGCTGAAAGACGG
CAACGAATTGCGCGGCGCGTTGAAAGAAGCCTTGTACGACCTGATTAAGCCGTTGGAAAAACCGCTGGTCTTGCCCGAAA
CTAAAGAGCCTTTCGTGATTATGCTTGCCGGTATCAACGGCGCGGGCAAAACCACGTCTATCGGCAAACTCGCCAAATAT
TTCCAAGCGCAGGGCAAATCCGTATTGCTGGCGGCAGGCGATACTTTCCGCGCCGCCGCGCGCGAGCAGCTTCAGGCTTG
GGGCGGGCGCAACAATGTAACCGTGATTTCACAAACCACGGGCGATTCCGCCGCCGTGTGCTTCGATGCCGTCCAAGCCG
CCAAAGCGCGCGGGATCGACATCGTGCTTGCCGACACCGCCGGCCGCCTGCCCACGCAGCTTCATTTGATGGAAGAAATC
AAAAAAGTGAAGCGCGTGCTGCAAAAAGCCATTCCCGGCGCGCCGCACGAAATTATCGTCGTACTCGATGCCAATATCGG
GCAAAACGCCGTCAACCAAGTCAAAGCCTTTGACGACGCATTGGGGCTGACGGGGCTTATCGTTACCAAACTCGACGGCA
CGGCAAAAGGCGGCATCCTCGCCGCGCTTGCTTCCGACCGCCCCGTCCCCGTCCGCTACATCGGCGTGGGCGAAGGCATA
GACGACCTGCGCCCGTTTGACGCGCGCGCGTTTGTGGACGCACTGCTGGATTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (217-416)

• SRP54-type protein, helical bundle domain (SRP54_N) (132-198)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	99.76	100	0.998