Detailed information    

insolico Bioinformatically predicted

Overview

Name   recG   Type   Machinery gene
Locus tag   KWZ00_RS05635 Genome accession   NZ_CP078115
Coordinates   1059583..1061625 (-) Length   680 a.a.
NCBI ID   WP_082285327.1    Uniprot ID   -
Organism   Neisseria gonorrhoeae strain O1G1370     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1054583..1066625
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KWZ00_RS11980 - 1055803..1056021 (-) 219 WP_003690584.1 hypothetical protein -
  KWZ00_RS05615 (KWZ00_05615) - 1056014..1056241 (-) 228 WP_003694773.1 hypothetical protein -
  KWZ00_RS05620 (KWZ00_05620) - 1056250..1057404 (-) 1155 WP_003690582.1 cupin domain-containing protein -
  KWZ00_RS05625 (KWZ00_05625) - 1057656..1057949 (+) 294 WP_002258326.1 hypothetical protein -
  KWZ00_RS05630 (KWZ00_05630) argC 1057946..1058989 (+) 1044 WP_003702278.1 N-acetyl-gamma-glutamyl-phosphate reductase -
  KWZ00_RS05635 (KWZ00_05635) recG 1059583..1061625 (-) 2043 WP_082285327.1 ATP-dependent DNA helicase RecG Machinery gene
  KWZ00_RS05640 (KWZ00_05640) secB 1061711..1062154 (-) 444 WP_003696693.1 protein-export chaperone SecB -
  KWZ00_RS05645 (KWZ00_05645) grxC 1062176..1062433 (-) 258 WP_003687379.1 glutaredoxin 3 -
  KWZ00_RS05650 (KWZ00_05650) rng 1062652..1064145 (+) 1494 WP_003687377.1 ribonuclease G -
  KWZ00_RS05655 (KWZ00_05655) - 1064180..1065430 (-) 1251 Protein_1120 ATP-binding protein -
  KWZ00_RS05660 (KWZ00_05660) - 1065512..1066141 (-) 630 WP_047918993.1 response regulator transcription factor -

Sequence

Protein


Download         Length: 680 a.a.        Molecular weight: 74806.82 Da        Isoelectric Point: 7.8842

>NTDB_id=586932 KWZ00_RS05635 WP_082285327.1 1059583..1061625(-) (recG) [Neisseria gonorrhoeae strain O1G1370]
MMSPETQKQLKITDVSAKKLDKLNLHTAWDLVLHLPLRYEDETHIMPIKDAPIGVPCQVEGEVIHQEVTFKPRKQLIVQI
ADGSGSVLFLRFIHFYAGHQKQTAVGKRIRAVGEIKHGFYGDEMIHPKIRDAEGGGLAESLTPVYPTVNGLNQPTLRRII
QTALDVTPLHDTLPDALLGRLKLPRLAESLRLLHSPPPSFTIHQLSDGTLPAWQRLKFDELLAQQLSMRLARQKRVSGTA
AALRGDGTLTQALRQALPFALTDAQEKVVSEICRDMAQTHPMHRLLQGDVGSGKTIVAALSALTAIESGAQVAVMAPTEI
LAEQHFIKFKQWLEPLGIEVVCLFGSLRKKAKDEAKAKLADGSVKIAVGTHALFSDGVAFHNLGLSIVDEQHRFGVAQRL
ALKNKGREVHQLMMSATPIPRTLAMSFFADLDVSVIDELPPGRTPIKTRLVNNVRRAEVEGFVLGTCRKGRQAYWVCPLI
EESETLQLQTAAETLARLQTALPEPNIGLVHGRMKAAEKAEVMAEFAAGRLNVLVATTVIEVGVDVPNAALMVIEHAERM
GLAQLHQLRGRVGRGAGESVCVLLFAEPLGELAKARLKVIYEHTDGFEIARQDLNIRGPGEFLGARQSGVPMLRFAKLEE
DLHLLEQARETAPMLIEQNPEIVEAHLARWLSGREGYLGV

Nucleotide


Download         Length: 2043 bp        

>NTDB_id=586932 KWZ00_RS05635 WP_082285327.1 1059583..1061625(-) (recG) [Neisseria gonorrhoeae strain O1G1370]
ATGATGTCGCCCGAAACCCAGAAACAGCTCAAAATCACCGATGTTTCCGCCAAGAAGCTCGACAAACTCAACCTCCATAC
CGCGTGGGATTTGGTGTTGCACCTGCCGCTGCGTTACGAGGACGAGACGCACATTATGCCGATTAAGGACGCGCCGATCG
GCGTGCCGTGTCAGGTCGAGGGCGAGGTTATCCATCAGGAAGTAACGTTCAAACCGCGCAAGCAGCTGATTGTTCAAATT
GCCGACGGTTCCGGCAGCGTCCTTTTTCTGCGCTTCATCCACTTTTACGCCGGACATCAGAAGCAGACGGCGGTCGGCAA
ACGCATCCGCGCCGTGGGCGAAATCAAACACGGATTTTACGGCGACGAGATGATTCATCCCAAAATCCGCGATGCCGAGG
GCGGCGGTTTGGCGGAAAGCCTCACGCCGGTTTACCCGACCGTAAACGGTTTGAACCAGCCCACTTTGCGCCGCATCATT
CAGACGGCGTTGGACGTTACGCCGCTGCACGACACCTTGCCTGATGCTTTATTAGGCCGTCTGAAGCTGCCGCGCCTTGC
CGAAAGCCTGCGCCTTTTGCATTCGCCGCCGCCGAGTTTCACTATTCATCAACTTTCAGACGGCACGCTGCCGGCGTGGC
AGCGGCTCAAATTCGACGAACTTTTGGCGCAACAGTTGTCCATGCGTTTGGCGCGGCAGAAGCGCGTCAGCGGCACGGCG
GCGGCATTGCGCGGCGACGGCACATTGACCCAAGCCCTGCGCCAAGCCCTGCCGTTTGCCCTGACCGATGCACAAGAAAA
AGTTGTTTCCGAAATCTGCCGCGATATGGCGCAAACCCACCCCATGCACCGCCTGCTGCAAGGCGATGTCGGCAGCGGCA
AAACCATCGTCGCCGCCTTATCCGCGCTGACCGCCATCGAATCAGGCGCGCAAGTGGCTGTAATGGCGCCCACTGAAATC
CTTGCCGAACAGCACTTCATCAAGTTCAAACAATGGCTCGAACCTTTGGGCATTGAAGTTGTCTGCCTTTTTGGCAGTTT
GCGCAAAAAAGCCAAAGACGAAGCCAAAGCCAAACTCGCCGACGGCAGCGTCAAAATCGCCGTCGGCACGCACGCCCTGT
TTTCAGACGGCGTGGCGTTTCACAATTTGGGCTTGAGCATTGTGGACGAACAGCACCGTTTCGGCGTTGCACAACGCCTC
GCACTCAAAAACAAAGGGCGCGAAGTCCATCAGCTGATGATGTCCGCCACACCCATCCCGCGCACGCTCGCCATGAGTTT
CTTCGCTGACTTGGACGTATCCGTCATCGACGAATTGCCGCCCGGGCGCACTCCGATTAAAACGCGCCTCGTCAACAACG
TCCGCCGCGCCGAAGTCGAAGGCTTCGTCCTCGGCACTTGCCGAAAAGGGCGGCAGGCATATTGGGTCTGCCCATTGATT
GAAGAAAGCGAAACCCTGCAACTGCAAACCGCCGCCGAAACCCTCGCCCGGCTTCAGACGGCATTGCCCGAACCCAATAT
CGGACTGGTACACGGGCGCATGAAGGCCGCCGAAAAGGCCGAAGTCATGGCGGAATTTGCCGCAGGCCGTCTGAACGTCT
TGGTTGCCACCACCGTCATCGAAGTCGGCGTAGATGTGCCCAACGCCGCCCTGATGGTGATCGAACACGCCGAGCGCATG
GGCTTGGCGCAGCTTCACCAATTACGCGGACGGGTAGGGCGCGGCGCGGGGGAAAGCGTGTGCGTCCTCCTGTTTGCCGA
ACCCTTGGGCGAACTCGCCAAAGCGCGGCTGAAAGTCATCTACGAACACACCGACGGCTTCGAAATCGCCCGCCAAGACC
TCAATATCCGCGGCCCCGGCGAATTTCTCGGCGCGCGCCAAAGCGGCGTGCCTATGCTGCGCTTCGCCAAGCTCGAAGAA
GACTTACACCTTTTGGAACAAGCGCGCGAAACCGCCCCGATGCTGATTGAACAAAACCCTGAAATCGTCGAAGCGCATTT
GGCAAGGTGGCTTTCCGGCAGGGAAGGTTATTTGGGTGTGTGA

Domains

Predicted by InterproScan.

ATP-dependent DNA helicase RecG, domain 3, C-terminal (RecG_dom3_C)

(604-666)

Helicase conserved C-terminal domain (Helicase_C)

(469-575)

DEAD/DEAH box helicase (DEAD)

(262-421)

RecG wedge domain (RecG_wedge)

(15-164)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recG Neisseria meningitidis strain C311

97.647

100

0.976