Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   KUD99_RS19565 Genome accession   NZ_CP078087
Coordinates   4204537..4204944 (-) Length   135 a.a.
NCBI ID   WP_003282729.1    Uniprot ID   -
Organism   Stutzerimonas stutzeri strain YWX-1     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 4199537..4209944
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KUD99_RS19545 - 4200495..4201361 (-) 867 WP_020305671.1 CheR family methyltransferase -
  KUD99_RS19550 - 4201422..4203470 (-) 2049 WP_011914956.1 methyl-accepting chemotaxis protein -
  KUD99_RS19555 - 4203549..4204085 (-) 537 WP_013984316.1 chemotaxis protein CheW -
  KUD99_RS19560 pilH 4204127..4204492 (-) 366 WP_003297216.1 twitching motility response regulator PilH -
  KUD99_RS19565 pilG 4204537..4204944 (-) 408 WP_003282729.1 twitching motility response regulator PilG Regulator
  KUD99_RS19570 gshB 4205181..4206131 (+) 951 WP_125460073.1 glutathione synthase -
  KUD99_RS19575 - 4206219..4207112 (+) 894 WP_019405529.1 energy transducer TonB -
  KUD99_RS19580 - 4207178..4207747 (+) 570 WP_011914961.1 YqgE/AlgH family protein -
  KUD99_RS19585 ruvX 4207744..4208172 (+) 429 WP_011914962.1 Holliday junction resolvase RuvX -
  KUD99_RS19590 pyrR 4208190..4208705 (+) 516 WP_011914963.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  KUD99_RS19595 - 4208759..4209775 (+) 1017 WP_011914964.1 aspartate carbamoyltransferase catalytic subunit -

Sequence

Protein


Download         Length: 135 a.a.        Molecular weight: 14826.22 Da        Isoelectric Point: 7.2439

>NTDB_id=586655 KUD99_RS19565 WP_003282729.1 4204537..4204944(-) (pilG) [Stutzerimonas stutzeri strain YWX-1]
MEQHSEGLKVMVIDDSKTIRRTAETLLKKVGCDVITAVDGFDALAKIADTHPRIIFVDIMMPRLDGYQTCALIKNNSSFK
STPVIMLSSKDGLFDKAKGRIVGSDQYLTKPFSKEELLGAIKAHVPDFAPVEQAS

Nucleotide


Download         Length: 408 bp        

>NTDB_id=586655 KUD99_RS19565 WP_003282729.1 4204537..4204944(-) (pilG) [Stutzerimonas stutzeri strain YWX-1]
ATGGAACAGCACTCCGAGGGCTTGAAGGTCATGGTGATCGACGATTCGAAAACGATTCGTCGCACTGCTGAAACCCTGCT
GAAGAAAGTAGGTTGCGATGTCATCACCGCAGTGGACGGTTTCGATGCCCTCGCCAAGATTGCGGATACTCATCCCCGCA
TCATCTTTGTCGATATTATGATGCCCAGGCTGGACGGTTATCAGACCTGCGCGTTGATCAAGAACAACAGTTCCTTCAAG
TCGACGCCAGTGATCATGCTGTCTTCCAAAGACGGCCTGTTCGACAAGGCGAAGGGGCGCATTGTCGGCTCCGATCAATA
CCTCACCAAACCGTTCAGCAAAGAAGAGCTGCTCGGTGCAATCAAGGCTCATGTCCCTGATTTCGCGCCGGTGGAGCAAG
CGTCCTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

76

92.593

0.704
  vicR Streptococcus mutans UA159

42.857

93.333

0.4