Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   M1F50_RS06475 Genome accession   NZ_CP096528
Coordinates   1310141..1311427 (+) Length   428 a.a.
NCBI ID   WP_031797797.1    Uniprot ID   -
Organism   Staphylococcus aureus strain RIVM_M084986     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 1305141..1316427
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  M1F50_RS06445 (M1F50_06430) - 1305536..1305649 (+) 114 WP_001789890.1 hypothetical protein -
  M1F50_RS06450 (M1F50_06435) tsf 1305684..1306565 (+) 882 WP_000201387.1 translation elongation factor Ts -
  M1F50_RS06455 (M1F50_06440) pyrH 1306702..1307424 (+) 723 WP_000057330.1 UMP kinase -
  M1F50_RS06460 (M1F50_06445) frr 1307443..1307997 (+) 555 WP_001280006.1 ribosome recycling factor -
  M1F50_RS06465 (M1F50_06450) - 1308370..1309140 (+) 771 WP_000473705.1 isoprenyl transferase -
  M1F50_RS06470 (M1F50_06455) - 1309147..1309929 (+) 783 WP_000868413.1 phosphatidate cytidylyltransferase -
  M1F50_RS06475 (M1F50_06460) eeP 1310141..1311427 (+) 1287 WP_031797797.1 RIP metalloprotease RseP Regulator
  M1F50_RS06480 (M1F50_06465) - 1311447..1313150 (+) 1704 WP_000814088.1 proline--tRNA ligase -

Sequence


Protein


Download         Length: 428 a.a.        Molecular weight: 48165.54 Da        Isoelectric Point: 9.5401

>NTDB_id=586589 M1F50_RS06475 WP_031797797.1 1310141..1311427(+) (eeP) [Staphylococcus aureus strain RIVM_M084986]
MSYLVTIIAFIIVFGVLVTVHEYGHMFFAKRAGIMCPEFAIGMGPKIFSFRKNETLYTIRLLPVGGYVRMAGDGLEEPPV
EPSMNVKIKLNEENEITHIILDDHHKFQQIEAIEVKKCDFKDDLFIEGITAYDNERHHFKIARKSFFVENGSLVQIAPRD
RQFAHKKPWPKFLTLFAGPLFNFILALVLFIGLAYYQGTPTSTVEQVADKYPAQQAGLQKGDKIVQIGKYKISEFDDVDK
ALDKVKDNKTTVKFERDGKTKSVELTPKKTERKLTKVSSETKYVLGFQPASERTLFKPIVYGFESFLKGSTLIFTAVVGM
LASIFTGGFSFDMLNGPVGIYHNVDSVVKAGIISLIGYTALLSVNLGIMNLIPIPALDGGRILFVIYEAIFRKPVNKKAE
TTIIAIGAIFMVVIMILVTWNDIRRYFL

Nucleotide


Download         Length: 1287 bp        

>NTDB_id=586589 M1F50_RS06475 WP_031797797.1 1310141..1311427(+) (eeP) [Staphylococcus aureus strain RIVM_M084986]
GTGAGCTATTTAGTTACAATAATTGCATTTATTATTGTTTTTGGTGTACTAGTAACTGTTCATGAATATGGCCATATGTT
TTTTGCGAAAAGAGCAGGCATTATGTGTCCAGAATTTGCGATCGGTATGGGGCCAAAAATTTTTAGTTTTAGAAAAAATG
AAACACTTTACACTATTAGGTTATTGCCTGTTGGTGGATATGTTCGTATGGCAGGAGATGGCTTAGAAGAACCACCAGTC
GAGCCTAGTATGAACGTTAAAATTAAACTGAATGAAGAAAATGAAATAACACATATCATATTAGATGATCATCATAAGTT
TCAACAAATTGAAGCGATCGAAGTTAAAAAATGTGATTTTAAAGATGACTTATTCATAGAAGGTATCACTGCTTATGATA
ACGAAAGACATCATTTTAAAATTGCTAGAAAGTCTTTCTTTGTTGAAAATGGTAGCTTAGTTCAAATTGCTCCGAGAGAC
AGACAATTTGCACATAAAAAGCCATGGCCGAAATTTTTAACATTATTTGCAGGACCGTTATTTAACTTTATATTAGCTTT
AGTCCTATTTATTGGTCTTGCATATTATCAAGGTACACCTACGTCTACTGTAGAACAAGTCGCAGATAAGTATCCAGCTC
AACAAGCAGGCTTACAAAAAGGCGATAAAATTGTCCAAATTGGCAAATATAAAATATCTGAATTTGATGATGTTGATAAG
GCGTTAGATAAAGTTAAAGATAATAAGACAACTGTTAAATTTGAACGTGATGGTAAAACAAAGTCGGTTGAATTAACACC
TAAAAAGACTGAAAGAAAACTGACTAAAGTAAGTTCAGAGACGAAGTATGTTCTCGGATTCCAACCAGCGAGTGAACGTA
CGCTCTTCAAACCAATTGTATATGGATTTGAAAGCTTTTTGAAAGGTAGTACACTAATTTTTACAGCTGTAGTAGGTATG
TTGGCTAGTATATTTACGGGCGGATTCTCGTTTGATATGTTAAATGGTCCGGTTGGTATTTATCATAACGTAGACTCAGT
TGTTAAAGCGGGTATCATTAGCTTAATTGGATACACTGCGTTATTAAGTGTAAACTTAGGTATTATGAATTTAATTCCTA
TTCCTGCACTAGACGGTGGTCGTATTTTATTTGTTATATATGAAGCGATTTTCAGAAAACCAGTTAATAAAAAAGCGGAA
ACAACGATTATTGCTATTGGTGCCATTTTCATGGTCGTTATTATGATATTAGTAACGTGGAATGATATTCGACGATATTT
CTTATAA

Domains


Predicted by InterProScan.

(191-265)

(9-413)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMD-9

39.443

100

0.397

  eeP Streptococcus thermophilus LMG 18311

38.889

100

0.393