Detailed information    

insolico Bioinformatically predicted

Overview

Name   hns   Type   Regulator
Locus tag   EVX74_RS14595 Genome accession   NZ_CP078045
Coordinates   3024983..3025309 (-) Length   108 a.a.
NCBI ID   WP_026055760.1    Uniprot ID   -
Organism   Acinetobacter lwoffii strain AL_065     
Function   repress the expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 3019983..3030309
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EVX74_RS14575 (EVX74_014485) - 3020178..3020837 (-) 660 WP_004729299.1 FHA domain-containing protein -
  EVX74_RS14580 (EVX74_014490) gspD 3020900..3023164 (-) 2265 WP_129716908.1 type II secretion system secretin GspD -
  EVX74_RS14585 (EVX74_014495) - 3023203..3024057 (-) 855 WP_004729294.1 type II secretion system protein N -
  EVX74_RS14590 (EVX74_014500) gspN 3024057..3024800 (-) 744 WP_004729292.1 type II secretion system protein N -
  EVX74_RS14595 (EVX74_014505) hns 3024983..3025309 (-) 327 WP_026055760.1 H-NS family nucleoid-associated regulatory protein Regulator
  EVX74_RS14600 (EVX74_014510) - 3025451..3025879 (-) 429 WP_004729290.1 acyl-CoA thioesterase -
  EVX74_RS14605 (EVX74_014515) - 3025888..3027081 (-) 1194 WP_004729289.1 hypothetical protein -
  EVX74_RS14610 (EVX74_014520) - 3027088..3027927 (-) 840 WP_004729288.1 hypothetical protein -
  EVX74_RS14615 (EVX74_014525) - 3027924..3028703 (-) 780 WP_004729286.1 uroporphyrinogen-III synthase -
  EVX74_RS14620 (EVX74_014530) hemC 3028703..3029626 (-) 924 WP_004729285.1 hydroxymethylbilane synthase -

Sequence

Protein


Download         Length: 108 a.a.        Molecular weight: 12318.07 Da        Isoelectric Point: 7.0196

>NTDB_id=586523 EVX74_RS14595 WP_026055760.1 3024983..3025309(-) (hns) [Acinetobacter lwoffii strain AL_065]
MMPDITHLSVEELKRLQAEAESLIASKKDQEIEDAYQQILAVAEKVGMTVEQLLEFGASKRKKSSRKSVEPRYRSKSNPD
DTWTGRGKQPRWLVAELEKGAKLDDFLI

Nucleotide


Download         Length: 327 bp        

>NTDB_id=586523 EVX74_RS14595 WP_026055760.1 3024983..3025309(-) (hns) [Acinetobacter lwoffii strain AL_065]
ATTATGCCAGATATTACGCATTTATCAGTAGAAGAGTTAAAACGTTTACAAGCAGAAGCAGAATCGCTGATTGCTTCAAA
AAAAGATCAAGAAATTGAAGACGCTTATCAGCAAATCTTGGCAGTTGCTGAGAAAGTTGGTATGACGGTTGAACAGTTAC
TTGAATTTGGTGCGTCTAAGCGTAAGAAATCATCACGTAAGTCGGTTGAGCCGCGTTACCGTAGCAAAAGCAATCCGGAC
GATACCTGGACTGGCCGTGGTAAACAGCCGCGCTGGTTGGTGGCTGAATTGGAAAAAGGCGCAAAGCTGGACGATTTCCT
GATCTAA

Domains

Predicted by InterproScan.

H-NS histone family (Histone_HNS)

(12-102)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  hns Acinetobacter baumannii strain A118

78.704

100

0.787