Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilS   Type   Regulator
Locus tag   EGT69_RS01690 Genome accession   NZ_CP078018
Coordinates   367956..369521 (-) Length   521 a.a.
NCBI ID   WP_112987268.1    Uniprot ID   -
Organism   Acinetobacter junii strain AJ_351     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 362956..374521
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EGT69_RS01675 (EGT69_001675) gpmI 363736..365280 (+) 1545 WP_004958494.1 2,3-bisphosphoglycerate-independent phosphoglycerate mutase -
  EGT69_RS01680 (EGT69_001680) - 365290..366465 (+) 1176 WP_005403527.1 S41 family peptidase -
  EGT69_RS01685 (EGT69_001685) pilR 366503..367933 (-) 1431 WP_125297254.1 sigma-54-dependent transcriptional regulator Regulator
  EGT69_RS01690 (EGT69_001690) pilS 367956..369521 (-) 1566 WP_112987268.1 sensor histidine kinase Regulator
  EGT69_RS01695 (EGT69_001695) - 369537..370172 (-) 636 WP_004957336.1 response regulator transcription factor GacA -
  EGT69_RS01700 (EGT69_001700) pbpG 370384..371445 (+) 1062 WP_125297253.1 D-alanyl-D-alanine endopeptidase PBP7/8 -
  EGT69_RS01705 (EGT69_001705) - 371609..372223 (+) 615 WP_004957343.1 DUF6915 family protein -
  EGT69_RS01710 (EGT69_001710) - 372247..373026 (+) 780 WP_125297252.1 hypothetical protein -
  EGT69_RS01715 (EGT69_001715) thrC 373093..374232 (-) 1140 WP_002048893.1 threonine synthase -

Sequence

Protein


Download         Length: 521 a.a.        Molecular weight: 59326.35 Da        Isoelectric Point: 6.6882

>NTDB_id=586362 EGT69_RS01690 WP_112987268.1 367956..369521(-) (pilS) [Acinetobacter junii strain AJ_351]
MLGKIASSVSQTVYKLGIWYSGYRLIISISLLLIYLLTAEQLASDYDYPFLYFYTLICFIAFSIFQLFLLKILPVQVTKQ
LILIFLIDVICLALITFSAGGPNLQLSLLYVIVIFSSAILLNSQLSLIVTLFAVIMVVYQRFIGDFFNYNNLNHLSNSIF
LAFLFFVVHAIGRIAVQRFKILETLTFHQSIEIHQLQNINRYILEQIEDGYLVLDESNHIVLSNPAANTLLGINVPVSTE
KTPLIKWQPDLFELIKFSELKDGEEFSFESQLSPYTVNVRVKHLIVPEQPLFLLILKDAQKLTQQVQQLKLAALGQLSAS
IAHEIRNPLAAIVQANELLKGSDIHQQDMLSRMISKQAKRIDSIIQDTLGMARNKPTEPQIIQLTEFFETLLNEDLADVK
SKIRISLPENLTIMFDEKQLRQVLINLIRNAIRHNAPEAEYIEVNIHLNDGRTRIDVIDFGTGVAKRDISQLFKPFFSTE
IKGTGLGLYLSHSFCEANHAKLNYIEQQQGACFRIECSKIH

Nucleotide


Download         Length: 1566 bp        

>NTDB_id=586362 EGT69_RS01690 WP_112987268.1 367956..369521(-) (pilS) [Acinetobacter junii strain AJ_351]
ATGCTGGGCAAAATAGCCTCTTCCGTCTCCCAAACCGTCTATAAGCTTGGTATTTGGTATAGTGGATATCGGCTGATTAT
CTCTATCAGCCTTTTGCTCATTTATTTATTAACGGCTGAGCAATTAGCCTCAGACTATGATTACCCTTTTTTATATTTCT
ATACACTGATTTGCTTTATTGCATTTAGTATTTTCCAGCTTTTTTTACTCAAAATACTTCCAGTACAAGTCACTAAACAG
CTCATTTTAATTTTTCTTATTGATGTGATTTGTTTAGCGTTGATTACTTTCTCTGCGGGGGGGCCAAACTTACAATTAAG
TTTGCTGTACGTAATCGTAATCTTTTCTTCTGCAATTCTACTAAACTCTCAGCTCTCGCTGATCGTGACACTTTTTGCTG
TCATTATGGTGGTTTATCAACGTTTTATTGGCGATTTCTTTAACTACAACAACTTAAATCATTTAAGTAATAGTATCTTT
CTCGCTTTTTTATTCTTTGTTGTGCATGCGATTGGACGTATTGCAGTACAACGTTTTAAAATTTTAGAGACGTTGACATT
CCATCAATCCATAGAGATTCATCAACTTCAAAATATCAACCGCTACATCCTTGAACAGATTGAAGATGGTTATCTCGTTC
TAGATGAAAGTAACCATATTGTTTTAAGTAATCCTGCTGCCAATACTTTACTTGGAATTAATGTCCCTGTTTCTACTGAG
AAAACACCTTTAATAAAATGGCAACCTGATCTTTTTGAGCTGATCAAATTTAGTGAGCTAAAAGATGGTGAGGAATTTAG
TTTTGAATCACAACTTAGCCCATACACGGTCAATGTTCGAGTCAAACATTTAATTGTTCCTGAACAGCCCCTATTCTTAT
TGATCCTGAAAGATGCCCAAAAACTTACTCAACAGGTTCAACAATTAAAATTGGCAGCTTTAGGACAACTTTCTGCAAGT
ATTGCACACGAAATCAGAAATCCACTTGCAGCTATTGTACAAGCCAATGAATTACTTAAGGGTAGCGATATCCATCAGCA
AGACATGCTATCTCGAATGATTAGCAAACAGGCAAAAAGGATCGATAGCATCATTCAAGATACTCTGGGAATGGCACGTA
ATAAACCCACTGAACCACAAATTATTCAATTAACAGAATTTTTTGAAACATTATTAAATGAAGATTTAGCAGATGTTAAA
TCTAAGATCCGAATCAGTTTGCCTGAAAATTTAACGATCATGTTTGATGAAAAACAATTAAGACAAGTATTAATCAATCT
TATTCGTAATGCTATAAGACACAATGCACCTGAAGCAGAATATATTGAAGTGAATATTCATCTAAATGATGGTCGCACCC
GAATAGATGTGATTGATTTTGGTACAGGCGTTGCAAAAAGAGATATTTCTCAGTTATTCAAACCATTTTTTAGTACCGAA
ATTAAAGGAACTGGTTTAGGATTGTACTTGTCTCATAGTTTTTGTGAGGCAAATCATGCAAAGCTCAATTATATAGAGCA
ACAACAAGGAGCATGTTTCAGGATTGAATGCTCAAAAATTCATTGA

Domains

Predicted by InterproScan.

His Kinase A (phospho-acceptor) domain (HisKA)

(313-374)

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(416-516)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilS Acinetobacter baumannii strain A118

65.116

99.04

0.645