Detailed information    

insolico Bioinformatically predicted

Overview

Name   comS   Type   Regulator
Locus tag   KV238_RS10800 Genome accession   NZ_CP078012
Coordinates   645413..645511 (-) Length   32 a.a.
NCBI ID   WP_021320241.1    Uniprot ID   -
Organism   Streptococcus equi subsp. zooepidemicus strain SEZ_18-036     
Function   activate transcription of comX (predicted from homology)   
Competence regulation

Genomic Context

Location: 640413..650511
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KV238_RS03180 (KV238_03170) - 641487..643268 (-) 1782 WP_111689737.1 acyltransferase family protein -
  KV238_RS03185 (KV238_03175) - 643265..643666 (-) 402 WP_043984005.1 MORN repeat-containing protein -
  KV238_RS03190 (KV238_03180) - 643672..644130 (-) 459 WP_043984007.1 low molecular weight protein-tyrosine-phosphatase -
  KV238_RS03195 (KV238_03185) ruvB 644378..645379 (-) 1002 WP_042669757.1 Holliday junction branch migration DNA helicase RuvB -
  KV238_RS10800 (KV238_03190) comS 645413..645511 (-) 99 WP_021320241.1 quorum-sensing system DWW-type pheromone Regulator
  KV238_RS03200 (KV238_03195) comR 645594..646508 (-) 915 WP_043030321.1 helix-turn-helix domain-containing protein Regulator
  KV238_RS03205 (KV238_03200) purB 646806..648098 (-) 1293 WP_041790267.1 adenylosuccinate lyase -
  KV238_RS03210 (KV238_03205) - 648695..648919 (-) 225 WP_012677202.1 hypothetical protein -
  KV238_RS03215 (KV238_03210) purK 648934..650007 (-) 1074 WP_043024882.1 5-(carboxyamino)imidazole ribonucleotide synthase -
  KV238_RS03220 (KV238_03215) purE 649994..650482 (-) 489 WP_021320238.1 5-(carboxyamino)imidazole ribonucleotide mutase -

Sequence

Protein


Download         Length: 32 a.a.        Molecular weight: 3937.66 Da        Isoelectric Point: 8.5430

>NTDB_id=586281 KV238_RS10800 WP_021320241.1 645413..645511(-) (comS) [Streptococcus equi subsp. zooepidemicus strain SEZ_18-036]
MFKKYQYYLFLAALFLLHSAQLLSDIDWWRVG

Nucleotide


Download         Length: 99 bp        

>NTDB_id=586281 KV238_RS10800 WP_021320241.1 645413..645511(-) (comS) [Streptococcus equi subsp. zooepidemicus strain SEZ_18-036]
ATGTTTAAAAAATACCAATACTATCTGTTTTTAGCTGCTTTATTTCTACTTCATTCTGCCCAATTACTTAGTGATATTGA
CTGGTGGCGTGTTGGTTAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comS Streptococcus pyogenes MGAS8232

51.613

96.875

0.5
  comS Streptococcus pyogenes MGAS315

37.5

100

0.375